Gene GM21_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3548 
Symbol 
ID8138920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp4109556 
End bp4110230 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID644871167 
ProductABC transporter related 
Protein accessionYP_003023327 
Protein GI253702138 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones151 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTG CAATCATAGA AACCAGCGGA CTCACCCGAA GCTACGGCGA GATCTGCGCC 
CTGAAACCTC TTGACCTCGC GGTCCCGGAG GGGGAATGGC TCACCGTCAT GGGACACTCC 
GGCTCCGGCA AGAGCACGCT CTTGAACCTC ATCGGAGGGC TGGACCGCCC CAGCGGCGGA 
TCGCTCTTCG TGGGAGGGAC GGATCTCCTC GCGCTCTCGG AGGATGGCCT CGCGCGCTTT 
CGGCGCGACT TCGTCGGCAT CGTCTTCCAG CAGCACCACC TGATCCCCTA CCTTACCGCT 
TTGGAAAACG TGATGATGTC GCAGTACTTC CACAGCGTTC CGGACGAGGC GGAGGCAAGG 
GTCGCCCTGG AGCGGGTGGG GCTCGGGCAC CGGCTCAAAA ACCGCCCCGG CGAGCTTTCG 
GGAGGCGAGC AGCAGCGCGT CTGCATCGCA CGCGCCATCA TCAACAGCCC GAAGCTCCTC 
TTAGGGGACG AGCCGACCGG CAACCTGGAC CACAAAAGCA CCGCCATGGT GCTGGAGCTT 
TTGCAGGAAC TGCGCGAAGA GGAGCGCTTT TGCATCGTCA TGGTGACCCA TAACCAGGAG 
GTCGCTTCCT GGGGGGACCG CACCATCCAC ATGGATGACG GCTTGGTGGT GCGCGAAGAG 
AGGAACCGCT CCTGA
 
Protein sequence
MAAAIIETSG LTRSYGEICA LKPLDLAVPE GEWLTVMGHS GSGKSTLLNL IGGLDRPSGG 
SLFVGGTDLL ALSEDGLARF RRDFVGIVFQ QHHLIPYLTA LENVMMSQYF HSVPDEAEAR 
VALERVGLGH RLKNRPGELS GGEQQRVCIA RAIINSPKLL LGDEPTGNLD HKSTAMVLEL 
LQELREEERF CIVMVTHNQE VASWGDRTIH MDDGLVVREE RNRS