Gene GM21_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3531 
Symbol 
ID8138903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4076454 
End bp4077125 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID644871150 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003023310 
Protein GI253702121 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones116 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTTT TGATCGTCGA AGACGCGGAA AAAACCGCTG AACAGTTGCG CAGGGGCCTG 
TCGGAGATGT CGGTGACGGT GGACGTTGCC CCGGACGGGC TGAAGGGGCT GGCGATGGCC
CGGGAGAGGG ACTACGACCT GATCGTCCTC GACCTCATGC TCCCCGGCAT CGACGGCTTC
GAGGTGGTGA AGCGGTTGCG CGAAGGGGGC TCCACCACTC CGATCATGAT CCTCACCGCG
CGCGACGAGG TGCACGACCG CATCACCGGG TTGCAGCTTG GCGCCGACGA TTACCTGGTG
AAGCCTTACT CTTTCGCCGA GCTCTGTGCC CGCATCCAGG CGTTGTTACG CCGGGGACAG
GTGGTGCAGC AGGACGAGAT ACAGGTGGCC GACCTTACCG TCAACTTCTT TGCCCACAAG
GCGACCCGCG CCGGCAAGAA CCTGGACCTC ACCCCGAAGG AGTTCGCCCT GCTCTCCCTG
TTGATCCGTC GGGCGGGAGA GGTGCAAAGC CGGTTGAGGA TCGCCGAGCG GGTCTGGAAC
TTAGGCTTCG AGGCCAACCT GAAGATCGTG GACGTCAAGG TGGCCGCCCT GAGGGCCAAG
GTGGACGGGC CTTTCGAGAA GAAGCTGATA CACACGGTGC GCGGCTTGGG GTACATACTT
GAAGATCGGT AA
 
Protein sequence
MYFLIVEDAE KTAEQLRRGL SEMSVTVDVA PDGLKGLAMA RERDYDLIVL DLMLPGIDGF 
EVVKRLREGG STTPIMILTA RDEVHDRITG LQLGADDYLV KPYSFAELCA RIQALLRRGQ
VVQQDEIQVA DLTVNFFAHK ATRAGKNLDL TPKEFALLSL LIRRAGEVQS RLRIAERVWN
LGFEANLKIV DVKVAALRAK VDGPFEKKLI HTVRGLGYIL EDR