Gene GM21_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3512 
Symbol 
ID8138884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4053935 
End bp4054813 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content61% 
IMG OID644871131 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003023291 
Protein GI253702102 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0000000000550533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTTC TTGTATTGGG TGCTACCGGC ATGCTCGGGC ACACCTTGAT GACCCGGCTC 
TCTGAGCGGG GCGACTTCAC GGTGCACGGC ACTGCCAGGA GCCGGGAGGG ACTCGACAGG
TGGTTTGCGC CACAGGTCGT GGAACGGATC AGCGTCGGAG TCGACGCGGA CAATTTCGAT
TCCATCCTTC GGGTGCTGGG CGAGGTGCGG CCCGATGTGG TGATCAACTG CGTCGGCATC
ATCAAGCAGC TCCCGGTGGC GAAGGATCCC GTCATCTCCA TAGGGATAAA CGCGCTCTTC
CCGCACAGGC TTGCCCTGGC GTGCAAGGCC GCCGGTGCCA GGTTGATACA CATCAGCACC
GACTGCGTCT TCCGCGGGGA CAGGGGAGGA TACACGGAGG ACGATCAGTC GGACGCCGAG
GACCTGTACG GTCGAAGCAA GTTCCTTGGG GAACTCGCCG ACCCGCACTG CATAACCCTG
CGCACCTCCA TAATCGGCCA TGAGCTGAAG GGGGGGCTCG GCCTCATCGA CTGGTTTCTC
AGCCAACAGG GGCCGGTCAA CGGCTTTACC AGGGCGATAT ACACAGGTTT CCCCACGGCC
GAAATGGTGC GCATCCTGGC GGAGTTCGTG ATTCCCAACC GCGAGCTGCA CGGGCTCTAC
CAGGTTGCCT CGTCTCCGAT ATCGAAGTAC GACCTGCTGA AGTTGGTCGC TGCGCGCTAC
GACAGAGCGA CGCCCATCGA GCCGCAGGAT AGTTTCTTTT GCGACCGGTC ACTGAACGGG
GCGAGGTTCG CGGCGGCTAC AGGCTACACC GCCCCGACAT GGCCGGAGAT GGTTGACACT
ATGTGGAAGG ATTACTCTGA AATGAGGTCC CACCTGTAG
 
Protein sequence
MKVLVLGATG MLGHTLMTRL SERGDFTVHG TARSREGLDR WFAPQVVERI SVGVDADNFD 
SILRVLGEVR PDVVINCVGI IKQLPVAKDP VISIGINALF PHRLALACKA AGARLIHIST
DCVFRGDRGG YTEDDQSDAE DLYGRSKFLG ELADPHCITL RTSIIGHELK GGLGLIDWFL
SQQGPVNGFT RAIYTGFPTA EMVRILAEFV IPNRELHGLY QVASSPISKY DLLKLVAARY
DRATPIEPQD SFFCDRSLNG ARFAAATGYT APTWPEMVDT MWKDYSEMRS HL