Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3477 |
Symbol | |
ID | 8138849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4022373 |
End bp | 4023341 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644871097 |
Product | Trans-hexaprenyltranstransferase |
Protein accession | YP_003023257 |
Protein GI | 253702068 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.00654823 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGCAG CGCTTGCCCT TATCGGGGAA GACCTGAAAA ATGTGGAACT GCAGTTCAAG AAGGATCTGC AGTCGGATGT CCCACTGATT CGCAAGGTGG GTGAGTATGT GCTCTCCAGC GGCGGCAAGC GTATCCGTCC CGCCCTGGTG CTCCTGGCTT CCAGGCTTTG CGGCTATGAC GGCAACCGCA GCGTTCCGCT GGCAAGTGTA GTGGAGTTCA TCCACACGGC GACCCTTTTG CACGATGACG TCGTCGACAA CGCGAACCTG CGCCGGGGGC TCGCCTCTGC CAATACGCTT TGGGGGAACG AGGCGTCGGT CCTGGTAGGC GATTTCCTCT TCTCGAAGTC GTTTTCCCTC ATGGTTACCG ACGGCGATCT GCGCATACTG AAGGTGCTGG CGGACGCCAC CACCATAATA GCCGAGGGTG AAGTCCTGCA ACTGGTCTGC ACCTGCGACC TAGACATAAC CGTTGAGCGC TACATCGAGG TGGTCCGGAG CAAGACGGCG ATCCTGCTCT CCGCCGCCTG CGAGGTGGGG GCCATCCTGG GAGAGGCCGA CCCCGAGCAC AGGCAGGCCC TGGCGGATTA CGGCATGGAC CTCGGCATCG CCTTCCAATT GATGGACGAC ACCCTGGATT ACACCGCCAG CGAGGAGCAG TTCGGCAAGA GCATCGGCCA CGACCTGGAG GAAGGGAAGA TCACTCTTCC CCTGATCCAC ACGCTCAGGA ACTGCACCGA GCAGGAGCGC GACCTGATCG CCTCGGTGGT GGAAAAGGAA CTCCTCTCCG ATGAGGATTT CGCCCAAGTG CTGGAGCTGG TGCAGCGCTA CGGCGGCATC GAGCACACCG TTGCCTCCGC GGCGGAGCAC GTGGTCCTTT GCAAGCGGCA CTTGGAGAAA TTCCCCCCTT CCGCCACCCG GGAGGCGCTC GCCGAACTCG CCGAGTATGT AGTGACCCGC GTCAAATAA
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Protein sequence | MDAALALIGE DLKNVELQFK KDLQSDVPLI RKVGEYVLSS GGKRIRPALV LLASRLCGYD GNRSVPLASV VEFIHTATLL HDDVVDNANL RRGLASANTL WGNEASVLVG DFLFSKSFSL MVTDGDLRIL KVLADATTII AEGEVLQLVC TCDLDITVER YIEVVRSKTA ILLSAACEVG AILGEADPEH RQALADYGMD LGIAFQLMDD TLDYTASEEQ FGKSIGHDLE EGKITLPLIH TLRNCTEQER DLIASVVEKE LLSDEDFAQV LELVQRYGGI EHTVASAAEH VVLCKRHLEK FPPSATREAL AELAEYVVTR VK
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