Gene GM21_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3473 
Symbol 
ID8138845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4018917 
End bp4019633 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID644871093 
Productcytochrome c biogenesis protein transmembrane region 
Protein accessionYP_003023253 
Protein GI253702064 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.320099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGC AGAACATCAG CATAGTAGGC GCCTTCGTCG CAGGGTTGTT GTCGTTTCTC 
TCCCCTTGCG TCTTGCCGCT TATTCCCTCC TACATCACCT ACATCACCGG GCTTTCCTTC
GCGGACCTGC AGGCTGAGCA CCCCTCCCAC AAGGTGCGCC AGCAGACCAT TATCCACTCG
CTGCTCTTCA TCGCGGGCTT CACCTGCGTC TTCGTGCTGC TGGGGGCGTC GGCGAGCTTT
CTGGGCGATT TCCTGCAGGA ACACAAAACG GCCATAAGGC GCATCGGCGG GGTGATGATC
GTCATCTTCG GCGTCCACGT CTCCGGGCTC TTCGACATCG GGCTGCTACT GGGGGAAAAG
AAACTCACCC TGCACCGAAA GCCGGCCGGT TACCTGGGGA GCTTCGTCGT CGGCGTGGTC
TTCGCGGCTG GGTGGACCCC CTGCATCGGC CCCATCCTCG CCACAATCCT GGCGGTGGCA
GCCACCGAGG GGCGCGGCGT TTGGCTGCTC CTTACCTACT CGATGGGGCT CGCCATCCCG
TTCTTCCTCG CCTCCCTCGC CTTGCACCAG TTCCTGGTGT TCTTCAAGCG TTTCAAACGA
CACATACGCC TGTTCGAGAT CATCACCGGC GTGTTCATGG TGATCGTCGG TATCCTGATC
TTCACCAATT CGCTGGTATT GATCAGCAGG TACACCAGCG CCTGGTTCGG AGAGTAG
 
Protein sequence
MQAQNISIVG AFVAGLLSFL SPCVLPLIPS YITYITGLSF ADLQAEHPSH KVRQQTIIHS 
LLFIAGFTCV FVLLGASASF LGDFLQEHKT AIRRIGGVMI VIFGVHVSGL FDIGLLLGEK
KLTLHRKPAG YLGSFVVGVV FAAGWTPCIG PILATILAVA ATEGRGVWLL LTYSMGLAIP
FFLASLALHQ FLVFFKRFKR HIRLFEIITG VFMVIVGILI FTNSLVLISR YTSAWFGE