Gene GM21_3470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3470 
Symbol 
ID8138842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4016425 
End bp4017507 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID644871090 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_003023250 
Protein GI253702061 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC TCACCCGCTA CATCGCCCGC GCCTATCTGA AGATGCTCTC CCTCTGCCTG 
GGTTCCTTCC TCACCATCTA CCTGGTGGTG GACTTCATGG AAAAGGTCTC CCGCTTCACG
CGGGCCGGCG CAAGCTGGAA GCATCTCGCC CTCTTCTTCA TCACCAAGAT CCCGGAGATG
ATCATCGACG CGGCGCCCCT CGCCGTCCTG ATGGCCACGC TGCTCACCCT TGGGACCCTC
TCCCTTACTT CGGAACTTAC CGCCATCCGC AGCTGCGGGG TGAGCCTCTT CCGCATCAGC
CTTCCGATCC TCGTCATCTC CGTCCTGATG AGCCTCGGGG TGCTGGCGAT CGGGGAGTTC
GTCCTTCCCA AGAGTTTCGC GCAGCGCACC TACATCCAGG AGGTGCTGAT CCAGAAGAAA
AGCGCCAGCG CCTTCTTCCG GCAGCAGAAC ATCTGGTTCA GGGAGGAAGG GACGGTGCTC
AGAGCGAGCC TTTTCGAGCC GGCAAGAAAC GAGCTGAAGG GGATCACCCT GTGGGACCTT
CAGCCCGGAA CCGGGGAGCC GCTCAAGCGG ACCGAAGCGG ACCTGGCGCT CCTGGGGCCT
AAGGGATGGG TTCTCCGGGA CGCGGTGGTG CGGCAGTTCA GAGACGGAGA GGTGAGCGCG
ACGCAGAAGT ACCGGGAACT GCCGGTCCAG CTCCAGTTGA AGCCCGCCGA CCTGAAGACG
CTGGGGAAAT ATTCGGACAG CATGTCGCTG GTGGAGCTGA ACCGCTACTG CAGGAAGCTG
AGGGCCAGCG GCTACGACCC CACCAGATAC GTCACCCAGA TGCACAGCAG GATCTCCATG
CCCTTCGGCT GCGCGGTGAT GGCCTTTCTC GGCATCCCGT TCGCGCTCCG GGGCGGAAGG
TCAAGCGGCA TCGCCTTCGG CGTCGGCCTC TCCATCGGGG TCGGTTTTCT CTACGTGATC
GTAAACTCCG TGATCATCTC GGTGGGACAG GTGGGGCTAT TGCCGCCGGT GGTGGCGGCT
TGGGCGACCA ATTTCATCTT CTTCGTGGCG GGGGCGTGGC TGTCGCTGAC GATTGACAAC
TGA
 
Protein sequence
MTILTRYIAR AYLKMLSLCL GSFLTIYLVV DFMEKVSRFT RAGASWKHLA LFFITKIPEM 
IIDAAPLAVL MATLLTLGTL SLTSELTAIR SCGVSLFRIS LPILVISVLM SLGVLAIGEF
VLPKSFAQRT YIQEVLIQKK SASAFFRQQN IWFREEGTVL RASLFEPARN ELKGITLWDL
QPGTGEPLKR TEADLALLGP KGWVLRDAVV RQFRDGEVSA TQKYRELPVQ LQLKPADLKT
LGKYSDSMSL VELNRYCRKL RASGYDPTRY VTQMHSRISM PFGCAVMAFL GIPFALRGGR
SSGIAFGVGL SIGVGFLYVI VNSVIISVGQ VGLLPPVVAA WATNFIFFVA GAWLSLTIDN