Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3464 |
Symbol | |
ID | 8138836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4007278 |
End bp | 4009464 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644871084 |
Product | glycoside hydrolase family 57 |
Protein accession | YP_003023244 |
Protein GI | 253702055 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAGC CACTTTACGT GTCGTTTCTC TGGCACATGC ATCAGCCTTT CTACAAGGAT CCGGTCCGGG GGGAGTACGT CCTGCCTTGG GCTTACCTGC ACGCGGTGAA GGACTACTAC GACATGCCCG CCATCGTCGA GGCGGTCGAA GGGGCCAAGG TGGTATTCAA CCTGGTCCCC TCGCTCTTGG AGCAGATCCT CGACTACGCC GGGGGGAAGG CGGTGGATCC CTTCCTGCTG CGGGCCCGCC CCTCGCCTGC CGAATTGGAC GACGGCGACC GGCTCTTCCT CCTCGAAAAC TTCTTCTCCG CGAACCGCCA GCGCATGATC GAGCCCTACC CCCGCTACAG GGAGCTCTTC ACCCGGGCCG GGGAGGGTGC CCCGGGTGCC GCGGCGATGC GCCTTGCCTC CTTCAGCGAG CAGGACCTCC TGGACCTCCA GGTCTGGTTC TATCTCGCCT GGACCGGCGA GGCGGCGAGG AGGCGCTTTC CCGTATTCGG GGAGCTGATC CGCAAGGGGA GCCACTTCAG CCAGGAAGAC AAGGAGCTTC TCCTGGAGAC GCAGCGCGAG CTGATCTCCC AGGTGATACC CCTGTACAAG AAGCTTCATC AAGAGGGGAA GGTCGAACTC TCGGTCACCC CCTACTTCCA CCCGATCATG CCGCTTCTGT GCGATTCGGG GATCGCGCGG GTCGCCCTCC CCACGGCGAA CCTCCCCAGC ATCCCCTTTC GCTACCCCGA GGATGCCAGG GCACAGCTGC TGCACGCGAT CGCCAGCTTC GAGAGGCTCT TCGGCTTTCC CCCGACCGGA ATCTGGCCCT CGGAAGGATC GGTGAGCGAC GAGGTGTTGG GCATCATGGC GCAGACGGGG CTTCCCTGGA CCGCCTCGGA CGAACGGGTG CTGGCCCATA CGTTGCCGGG GGGGCTGGAC CGTGAGCGCG ACCCCTTGTA CCACCCGTAC ACCTTCAGTA AGGACGGGCG CGAGATCGCG CTTTTCTTCC GGGACCAGGG GCTGTCGGAC CTGATCGGCT TCACCTACTC CCAGTGGGAG ACCGAAAGGG CGGTGGGAGA TTTCCTGGCG CGGCTGAAGG AGGTGAGGCA GCGCAACCGC CAGGCCCGCG TGGTGCCGGT GATTCTCGAC GGCGAAAACG CCTGGGAGTA CTACGCGGAG AACGGCTTTC CCTTCCTCTG CCGGCTCTAC GCCGCCCTGG TGCAGACCCC CGGGGTGCAA CTCGCCACCT TTTCGGAGGT GCTCTTGCGG ACAGGCGAGC GGCGCGTCCT GGAGCACGTC CACCCGGGAT CGTGGATCAA CGCCGACTAC GGCATCTGGA TCGGCAAGCC CGAGGAGAAC CTCGGGTGGG ATTACATCGC CAAGGCGCGT GCCGCGGCGG TGCAGGGAAA CGCGGAGATG GCGACCCTCC TGGCCGGGGG GGAGAGCAGC GATGAGGCCG CCCGGCAGGC GTGCATGGCG CTCTACGCAG CGCAGGGGAG CGACTGGTTC TGGTGGTACG GCGACGATCA CTTCTCCCCG CATGCAGGGA GGTTCGACCT GCTGTTTCGC AGCCACCTGA TGAACGTCTA TCAGCTGCTG GCCCTGGAGG TTCCCGGCGA GCTGCAGCAG CCGATAAAGA AAGAACGCCC ACCCGGTTTC GTGCGCGCGC CCGCGGGGCT GGTCACCCCC GCCATAACGG GTGTGGTGAA CGACTACTTT GAGTGGCTCT CGGCAGGGCT ATACGACCTG ACCCGGCAGG GGGGCGCCAT GCACGCCGCC GACAACCTGC TGCAGTCCTT CTATTACGGC TTCGACCTGG AGTACCTCTA TTTCCGCATC GACGGAGTGC AGCCGCTGGA AAAGACGTTC AGGCCGGAGG ACAGGCTCTC GCTGCATCTG CTCTGCGGTG GGGAGTGGCG GCTCGACATG CAGTTGGGCG AGGGGGAGGG GGAGTTGCAG GTGCTGAGGG AGGGAGCCTG GCATGGCAGC GGCAGTATCG GACGCTACTG CATGGGGCGC AGCGCTGGAG CGCGCGTGCC CCTGCCTCCC TTAAGGCTCG AAGGGGGAGG GACGGTACTT TGCTATCTCT GCGTCACCCG CGCCGGGACC CAGGTGGGAC GCTGGCCGGC CGACGCTGCA CTCCCCTTGG TCTGCGCCGG GCCGGAACTT GGATGCGAGG CTCATTATAA TCATTAA
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Protein sequence | MTEPLYVSFL WHMHQPFYKD PVRGEYVLPW AYLHAVKDYY DMPAIVEAVE GAKVVFNLVP SLLEQILDYA GGKAVDPFLL RARPSPAELD DGDRLFLLEN FFSANRQRMI EPYPRYRELF TRAGEGAPGA AAMRLASFSE QDLLDLQVWF YLAWTGEAAR RRFPVFGELI RKGSHFSQED KELLLETQRE LISQVIPLYK KLHQEGKVEL SVTPYFHPIM PLLCDSGIAR VALPTANLPS IPFRYPEDAR AQLLHAIASF ERLFGFPPTG IWPSEGSVSD EVLGIMAQTG LPWTASDERV LAHTLPGGLD RERDPLYHPY TFSKDGREIA LFFRDQGLSD LIGFTYSQWE TERAVGDFLA RLKEVRQRNR QARVVPVILD GENAWEYYAE NGFPFLCRLY AALVQTPGVQ LATFSEVLLR TGERRVLEHV HPGSWINADY GIWIGKPEEN LGWDYIAKAR AAAVQGNAEM ATLLAGGESS DEAARQACMA LYAAQGSDWF WWYGDDHFSP HAGRFDLLFR SHLMNVYQLL ALEVPGELQQ PIKKERPPGF VRAPAGLVTP AITGVVNDYF EWLSAGLYDL TRQGGAMHAA DNLLQSFYYG FDLEYLYFRI DGVQPLEKTF RPEDRLSLHL LCGGEWRLDM QLGEGEGELQ VLREGAWHGS GSIGRYCMGR SAGARVPLPP LRLEGGGTVL CYLCVTRAGT QVGRWPADAA LPLVCAGPEL GCEAHYNH
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