Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3459 |
Symbol | |
ID | 8138831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4002506 |
End bp | 4003465 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644871079 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003023239 |
Protein GI | 253702050 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGA TCGAACTCAC CTTCCCCAGC GATTCCGATC CGGAGCGGCT GGACAGCTTC ATATCCCGCA ACGTACCGGA GCTGACCCGC TCGGCGGCCC TAAGACTCAT AGAGACCGGG TTCGCCACCG TCAACGGCTC GAAGCAAAAG CCCGCCTTGA AACTCAAGGG AGGCGAAGTG GTCCAGGTGG TGGTCCCGCC TCCGGTCCCC GCCGAGCCCC AGCCCGAGGA GATCCCCATC GAGGTGCTCT ACGAGGATGG CGAGCTGGTG GTGGTGAACA AGGGGGCGGG GATGGTGGTG CATCCCGGCG CCGGCAACCC GGAAGGGACG CTGGTGAACG CCCTGCTGGC CCACTGCAAG GACCTTTCCG GCATCGGCGG GGAACTGCGT CCCGGCATCG TGCACCGCAT CGACAAGGAC ACCTCCGGCA CCCTGGTCGT CGCCAAGAGC GACCGGGCCC ACAACGCCCT GGCCGAACAG TTCAAGGAAC ACACCATAAA AAGGGTCTAC CTCGCCCTCG TCTACGGCTC GCCCAAGGAA GACAAGGGGA GAATCGAGTC GAGCATCGGC CGCCATCCCA CCGACCGAAA GAAGATGTCC GCGAAGGCGC GCCACGGCAA GCAGGCGGTG ACCCACTGGC GGGTGGTGGC CCGCTACCCC GGCATTACGC TGATACGCCT GAGGCTCGAG ACCGGCCGCA CCCACCAGAT CAGGGTGCAC ATGTCAGAGG CCGGGCACCC GCTTTTGGCA GACGAGGTGT ACGGCGGCAC GGGAAGGCTC TCCGGCGTGC AGGACCCGGT CCTCAAACAG ATGATCAAGT CGATGGGGCG GCAGGCGCTG CACGCGAAGA CGCTCGGCTT CCTGCACCCG GTCTCCGGAA AGTACCTGGA GTTCGACACG GAACTCCCCC CGGACATGGC AGGCATCGTC GCCTATCTGG AAGAAAAAAA CAGGGGCTAA
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Protein sequence | MEPIELTFPS DSDPERLDSF ISRNVPELTR SAALRLIETG FATVNGSKQK PALKLKGGEV VQVVVPPPVP AEPQPEEIPI EVLYEDGELV VVNKGAGMVV HPGAGNPEGT LVNALLAHCK DLSGIGGELR PGIVHRIDKD TSGTLVVAKS DRAHNALAEQ FKEHTIKRVY LALVYGSPKE DKGRIESSIG RHPTDRKKMS AKARHGKQAV THWRVVARYP GITLIRLRLE TGRTHQIRVH MSEAGHPLLA DEVYGGTGRL SGVQDPVLKQ MIKSMGRQAL HAKTLGFLHP VSGKYLEFDT ELPPDMAGIV AYLEEKNRG
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