Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3447 |
Symbol | |
ID | 8138814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3984140 |
End bp | 3985066 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644871063 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003023228 |
Protein GI | 253702039 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00000000182923 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCAAAC CCACTCATGA AGATCCACGT TCCTCGAAAG CAACTTTCTG GCTGATACTG ACCACCTTCT TCTGGGGGGG CAGTTTCATC TTCAACAAGA TCGGTTTCCG CGAGATTCCG CCGGTGACCT TCCTGTTCTT CCGCTTCGCT CTGGCAACGC TGCTCATGGC GGCGATCTGC CTGCCGCGCC TGAAGCGCTT CAACCGGAAC ATTCTGAGGA AGGGGCTCAT CGTCGGAGTC GCTCTTGCCG CCACCAACCT CTCCTTCGTC CTCGGGGTGA GCGGCACCAG CGTCTCGCGC GCCGGGTTCC TGAACAACCT GTTCGTGCTC ATCATCCCTT TGCTTTGCTT CGCCTTCTGG CGCGAGCGCT TCGACCGCTG GACCGCGACC GGGCTCTTCC TCGCCCTCGC CGGTTTGTGG CAACTGGCCC AGGGCGGGGT GGAAGGGTTC AACAAGGGGG ACCTGCTCTC CACCCTGTGT GCGCTCTTCA TCGCCCTGCA CATCATTTCG GTGTCGAAAC TTTTGCGGGA CGAAGATGTC TACCTGTTGA GCCTGGTGCA GTTCGCCACG GTCACGGCGG TAGGCGGCCT GCTGTTTCTG GTACTCCCTG CGCCTCCCTT TACCATCAGC CCGGTCTCCG GCTGGTCGCT CGTTTACTGC GCAATCTTTC CTACCGTGAT CTGCTTCACC CTGCAAAACG CCTATCAGCG CTACACCACC CCCACCAAGG CGGGGCTCAT CTACACCATG GATCCGGTCT GGAGCATGCT TGGGGGGACG CTGATCCTGG GGGAGCGGCT GACTGCAAGC GAGTGGCTCG GCTGCTCCCT CATCTTTGCC TCCGTCATTC TCCCCCTCTC GATCAAGCGC CTGCGTGAGC GGCACCTGGG TATCGATTAC CGCGCCGAAG GCGCAGCTGC CGACTAG
|
Protein sequence | MPKPTHEDPR SSKATFWLIL TTFFWGGSFI FNKIGFREIP PVTFLFFRFA LATLLMAAIC LPRLKRFNRN ILRKGLIVGV ALAATNLSFV LGVSGTSVSR AGFLNNLFVL IIPLLCFAFW RERFDRWTAT GLFLALAGLW QLAQGGVEGF NKGDLLSTLC ALFIALHIIS VSKLLRDEDV YLLSLVQFAT VTAVGGLLFL VLPAPPFTIS PVSGWSLVYC AIFPTVICFT LQNAYQRYTT PTKAGLIYTM DPVWSMLGGT LILGERLTAS EWLGCSLIFA SVILPLSIKR LRERHLGIDY RAEGAAAD
|
| |