Gene GM21_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3439 
Symbol 
ID8138806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3973895 
End bp3976021 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content64% 
IMG OID644871055 
Productglycogen debranching enzyme GlgX 
Protein accessionYP_003023220 
Protein GI253702031 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases 
TIGRFAM ID[TIGR02100] glycogen debranching enzyme GlgX 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00000000000000156565 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAGTTA CGGCAAAAAC AAACAAGAAA AACGCACCGG CGTACCCCAA GGGGAACACC 
TCGCCGCTCG GCGCCACCGT GTCGCACGGA GGCGTTAACT TCAGCGTCTT CGCCAGAGAC
TGCACCGGAG TCGAACTCCT GCTCTTCGAT GCCGCCGACG ACGCCATCCC CTCCCGCGTC
ATCACCCTCG ACCCGCATCA AAACCGCACC TACCATTACT GGCACGTCTT CGTCCCCGGC
ATAGGAGAAG GGCAGCTTTA CGGCTTCCGG GTGGCCGGCC CCTTCGAGCC GCAGCGCGGG
CGCAGGTTCG ACCCCGGCAA GGTCCTGATC GATCCCTACG GCCGCGCCGT CGCGGTCCCC
AAGGGGTACT GCAGGGGCGA CGCCTGCCTC CCCGGGGACA ACGCCGCGAC CGCCATGAAG
AGCGTCGTCG CGGACCCGCG CGACTACGAC TGGGAGGGGG ACCTCCCCCT CAAGCGCCCT
TACTCCAACA CCGTCATCTA CGAGATGCAC GTGGCCGGTT TCACCAAGGA CCCTTCCTCC
GGGGTCTCGG CCGACAAGCG CGGTACCTAC GCCGGGCTTG TGGCGAAGAT CCCCTACTTG
AAGGACCTGG GGGTCACCGC GGTGGAACTG CTGCCGGTGT TCCAGTTCGA CCCCCACGAC
GCCCCCTTCG GGCTGGTCAA TTATTGGGGG TACAGCCCCA TATCCTTCTT CGCTCCCCAT
GCCGGCTTCA GTTCGCGCAC CGAACCGCTG GGACCTCTGG ACGAGTTCCG CGACATGGTG
AAGGCGCTGC ACAAGGCGGG AATAGAGGTG ATCCTCGACG TGGTTTACAA CCACACCTCC
GAGGGGGACC ATAAGGGACC TACCTTCTGC TACCGCGGCT TCGCAAACGA CGTCTACTAT
TCGCTCGCCC CAGACGGGGG CTACATCAAC CATACAGGCT GCGGCAACAC CATGAACGCC
AACCACCACG TGGTGCGCCG GCTGATCATC GACAGCCTGC ACTACTGGGT CAAGGAGATG
CACGTCGACG GCTTCCGTTT CGACCTTGCC TCCATCCTCT CCCGGGACGG GCAGGGGCGC
CCGCTCAAGA ACCCCCCCAT TCTCTGGGAC ATCGAGTCGG ACCCGGCACT GGCGGGGATC
AAGCTGATCG CCGAGGCGTG GGACGCAGGG GGGCTCTACC AGGTGGGAAG CTTCATCGGC
GACAGCTGGA AGGAATGGAA CGGGGAGTTC CGCGACGACG TGCGCCGCTT CCTCAAGGGG
GACGAAGGGG TGGTATCCCG GTTCGCGGCG AGGATGCTGG CGAGCCCGGA CATCTACGGG
CACCAGGAGC GCGAACCGGA GCAAAGCATC AACTTCGTCA CCTGTCACGA CGGCTTTACC
TTGAACGACC TGGTCTCGTA CAACGAAAAG CACAACGAGG CCAACGGCGA GTCCAACAGG
GACGGCTCCG ACGCCAACCT GAGCTGGAAC TGCGGCGTCG AAGGCCCCGC CGGGGACCCG
GAGGTCGAGG AGCTGCGCAA CCGGCAGGTC AAGAACTTCA TGGCGGTGAC GCTTTTAGCC
CTTGGTACCC CGATGATCCT GATGGGGGAC GAGATGCGGC GCAGCCAGCA GGGTAACAAC
AACGCCTACT GCCAGGACAA CCGCATCGGC TGGTTCGATT GGAGCCTCCA CGAGCGCCAT
GCCGACATTT ACCGCTTCAC CAAGGAGATG ATCAAGGCAA GGCTGATGCA GACCGGCAAA
CTGGAGGACG CCCGGACCCT GAGCCAGTTG CTGGGGCAGG CGCGCCTGGA ATGGCACGGG
GTCAACCTCG GGACCCCCGA CTGGAGTCAC GAGTCGCACA GCATTGCCCT GACAGTCTGG
AGCCGCTCCC GCCACGTGGT GTTCCATTAC ATGGTCAACG CGTACTGGGA ACCGCTCACC
TTCACGCTTC CCCCCCCGCG CAGGCTTCCC GGCGGCACCT GGTACCGCTG GATCGACACC
TCTCTTGCTT CGCCCGATGA CATCGTTCCC TGGGATCTCA CCCCGGCGCA TGCCTCGGGA
AGCTATCCGC TCCCCCCGCG CAGCCTCGCG GTGCTGATTG CCAAGGCGCG CAGGGCAGGC
GGGCGCCCCG CTCCGGACGC AGTTTAA
 
Protein sequence
MKVTAKTNKK NAPAYPKGNT SPLGATVSHG GVNFSVFARD CTGVELLLFD AADDAIPSRV 
ITLDPHQNRT YHYWHVFVPG IGEGQLYGFR VAGPFEPQRG RRFDPGKVLI DPYGRAVAVP
KGYCRGDACL PGDNAATAMK SVVADPRDYD WEGDLPLKRP YSNTVIYEMH VAGFTKDPSS
GVSADKRGTY AGLVAKIPYL KDLGVTAVEL LPVFQFDPHD APFGLVNYWG YSPISFFAPH
AGFSSRTEPL GPLDEFRDMV KALHKAGIEV ILDVVYNHTS EGDHKGPTFC YRGFANDVYY
SLAPDGGYIN HTGCGNTMNA NHHVVRRLII DSLHYWVKEM HVDGFRFDLA SILSRDGQGR
PLKNPPILWD IESDPALAGI KLIAEAWDAG GLYQVGSFIG DSWKEWNGEF RDDVRRFLKG
DEGVVSRFAA RMLASPDIYG HQEREPEQSI NFVTCHDGFT LNDLVSYNEK HNEANGESNR
DGSDANLSWN CGVEGPAGDP EVEELRNRQV KNFMAVTLLA LGTPMILMGD EMRRSQQGNN
NAYCQDNRIG WFDWSLHERH ADIYRFTKEM IKARLMQTGK LEDARTLSQL LGQARLEWHG
VNLGTPDWSH ESHSIALTVW SRSRHVVFHY MVNAYWEPLT FTLPPPRRLP GGTWYRWIDT
SLASPDDIVP WDLTPAHASG SYPLPPRSLA VLIAKARRAG GRPAPDAV