Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3439 |
Symbol | |
ID | 8138806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3973895 |
End bp | 3976021 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644871055 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_003023220 |
Protein GI | 253702031 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00000000000000156565 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAGTTA CGGCAAAAAC AAACAAGAAA AACGCACCGG CGTACCCCAA GGGGAACACC TCGCCGCTCG GCGCCACCGT GTCGCACGGA GGCGTTAACT TCAGCGTCTT CGCCAGAGAC TGCACCGGAG TCGAACTCCT GCTCTTCGAT GCCGCCGACG ACGCCATCCC CTCCCGCGTC ATCACCCTCG ACCCGCATCA AAACCGCACC TACCATTACT GGCACGTCTT CGTCCCCGGC ATAGGAGAAG GGCAGCTTTA CGGCTTCCGG GTGGCCGGCC CCTTCGAGCC GCAGCGCGGG CGCAGGTTCG ACCCCGGCAA GGTCCTGATC GATCCCTACG GCCGCGCCGT CGCGGTCCCC AAGGGGTACT GCAGGGGCGA CGCCTGCCTC CCCGGGGACA ACGCCGCGAC CGCCATGAAG AGCGTCGTCG CGGACCCGCG CGACTACGAC TGGGAGGGGG ACCTCCCCCT CAAGCGCCCT TACTCCAACA CCGTCATCTA CGAGATGCAC GTGGCCGGTT TCACCAAGGA CCCTTCCTCC GGGGTCTCGG CCGACAAGCG CGGTACCTAC GCCGGGCTTG TGGCGAAGAT CCCCTACTTG AAGGACCTGG GGGTCACCGC GGTGGAACTG CTGCCGGTGT TCCAGTTCGA CCCCCACGAC GCCCCCTTCG GGCTGGTCAA TTATTGGGGG TACAGCCCCA TATCCTTCTT CGCTCCCCAT GCCGGCTTCA GTTCGCGCAC CGAACCGCTG GGACCTCTGG ACGAGTTCCG CGACATGGTG AAGGCGCTGC ACAAGGCGGG AATAGAGGTG ATCCTCGACG TGGTTTACAA CCACACCTCC GAGGGGGACC ATAAGGGACC TACCTTCTGC TACCGCGGCT TCGCAAACGA CGTCTACTAT TCGCTCGCCC CAGACGGGGG CTACATCAAC CATACAGGCT GCGGCAACAC CATGAACGCC AACCACCACG TGGTGCGCCG GCTGATCATC GACAGCCTGC ACTACTGGGT CAAGGAGATG CACGTCGACG GCTTCCGTTT CGACCTTGCC TCCATCCTCT CCCGGGACGG GCAGGGGCGC CCGCTCAAGA ACCCCCCCAT TCTCTGGGAC ATCGAGTCGG ACCCGGCACT GGCGGGGATC AAGCTGATCG CCGAGGCGTG GGACGCAGGG GGGCTCTACC AGGTGGGAAG CTTCATCGGC GACAGCTGGA AGGAATGGAA CGGGGAGTTC CGCGACGACG TGCGCCGCTT CCTCAAGGGG GACGAAGGGG TGGTATCCCG GTTCGCGGCG AGGATGCTGG CGAGCCCGGA CATCTACGGG CACCAGGAGC GCGAACCGGA GCAAAGCATC AACTTCGTCA CCTGTCACGA CGGCTTTACC TTGAACGACC TGGTCTCGTA CAACGAAAAG CACAACGAGG CCAACGGCGA GTCCAACAGG GACGGCTCCG ACGCCAACCT GAGCTGGAAC TGCGGCGTCG AAGGCCCCGC CGGGGACCCG GAGGTCGAGG AGCTGCGCAA CCGGCAGGTC AAGAACTTCA TGGCGGTGAC GCTTTTAGCC CTTGGTACCC CGATGATCCT GATGGGGGAC GAGATGCGGC GCAGCCAGCA GGGTAACAAC AACGCCTACT GCCAGGACAA CCGCATCGGC TGGTTCGATT GGAGCCTCCA CGAGCGCCAT GCCGACATTT ACCGCTTCAC CAAGGAGATG ATCAAGGCAA GGCTGATGCA GACCGGCAAA CTGGAGGACG CCCGGACCCT GAGCCAGTTG CTGGGGCAGG CGCGCCTGGA ATGGCACGGG GTCAACCTCG GGACCCCCGA CTGGAGTCAC GAGTCGCACA GCATTGCCCT GACAGTCTGG AGCCGCTCCC GCCACGTGGT GTTCCATTAC ATGGTCAACG CGTACTGGGA ACCGCTCACC TTCACGCTTC CCCCCCCGCG CAGGCTTCCC GGCGGCACCT GGTACCGCTG GATCGACACC TCTCTTGCTT CGCCCGATGA CATCGTTCCC TGGGATCTCA CCCCGGCGCA TGCCTCGGGA AGCTATCCGC TCCCCCCGCG CAGCCTCGCG GTGCTGATTG CCAAGGCGCG CAGGGCAGGC GGGCGCCCCG CTCCGGACGC AGTTTAA
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Protein sequence | MKVTAKTNKK NAPAYPKGNT SPLGATVSHG GVNFSVFARD CTGVELLLFD AADDAIPSRV ITLDPHQNRT YHYWHVFVPG IGEGQLYGFR VAGPFEPQRG RRFDPGKVLI DPYGRAVAVP KGYCRGDACL PGDNAATAMK SVVADPRDYD WEGDLPLKRP YSNTVIYEMH VAGFTKDPSS GVSADKRGTY AGLVAKIPYL KDLGVTAVEL LPVFQFDPHD APFGLVNYWG YSPISFFAPH AGFSSRTEPL GPLDEFRDMV KALHKAGIEV ILDVVYNHTS EGDHKGPTFC YRGFANDVYY SLAPDGGYIN HTGCGNTMNA NHHVVRRLII DSLHYWVKEM HVDGFRFDLA SILSRDGQGR PLKNPPILWD IESDPALAGI KLIAEAWDAG GLYQVGSFIG DSWKEWNGEF RDDVRRFLKG DEGVVSRFAA RMLASPDIYG HQEREPEQSI NFVTCHDGFT LNDLVSYNEK HNEANGESNR DGSDANLSWN CGVEGPAGDP EVEELRNRQV KNFMAVTLLA LGTPMILMGD EMRRSQQGNN NAYCQDNRIG WFDWSLHERH ADIYRFTKEM IKARLMQTGK LEDARTLSQL LGQARLEWHG VNLGTPDWSH ESHSIALTVW SRSRHVVFHY MVNAYWEPLT FTLPPPRRLP GGTWYRWIDT SLASPDDIVP WDLTPAHASG SYPLPPRSLA VLIAKARRAG GRPAPDAV
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