Gene GM21_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3434 
Symbol 
ID8138801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3970205 
End bp3971074 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content62% 
IMG OID644871050 
Productfatty acid hydroxylase 
Protein accessionYP_003023215 
Protein GI253702026 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0000865643 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAGAA GATCTGAACT CAAAAAGGGT GAACTTCCCA GATGGCTCAA CACTATGTTG 
ATCTTCGGCA CCATGGCGGC GGTGGTCGTC ATGGAGTTGA AGCGGCCGCT CAGGAAGGAC
CGGGAGGACA AGGCCTCCCG CAATGCACGA AACGCCACCT TCGCCCTGTT GTCGGCCGCG
ACGGTCGGCC TTGCCGAGAA GCCGGTGGTG GCGCCTCTGG CCCTGGCGGT GCATAAAAAA
CGTCTCGGGC TCCTGAAACT GTACAGGCTC CCGGTCTGGG CCGACCTGAT GCTTTCCGTA
TTGCTGCTCG ACTACACCCT CTACATCTGG CACTACCTGA CCCACAAGAT GCCGTTTTTG
TGGCGTTTCC ACCGCCCTCA CCACGTGGAT CGCGACCTGG ACGCCAGCAC GGCGCTGCGG
TTCCACTTCG GCGAGTTGAT GCTGTCGGTC CCCTGGCGCG CAGCCCAGGT GCGCCTGATC
GGGGTCTCGC CGCTTGGGCT CGCCCTCTGG CAGACGCTCA CCCTGATGGA GATCCTGTTC
CACCACTCCA ACCTGCGGCT CCCCTTCGCT TTGGAGCGCC GCCTCTGCCG GCTAATCGTC
ACCCCCCGCA TGCACGGGAT CCATCATTCG GTGGTTCGCG GCGAAACCGA CTCCAACTGG
AGCACCATTT TCTCCTGGCC CGATTACCTG CACGGTACCG TGCGGCTGAA CGTCCTGCAG
GACAACATAG ACATTGGTGT GGTCGGCTAC CAGGACCCGG CGCAACTGAC CCTCGGGAAA
GTTTTGGCCA TGCCTTTTCG ACCCGAGATC AAGGCCATTG CTCCGGAAGC GCGGCGGTTG
TCCATCCCGA GGACCGTGCT GGCGCCGTAA
 
Protein sequence
MARRSELKKG ELPRWLNTML IFGTMAAVVV MELKRPLRKD REDKASRNAR NATFALLSAA 
TVGLAEKPVV APLALAVHKK RLGLLKLYRL PVWADLMLSV LLLDYTLYIW HYLTHKMPFL
WRFHRPHHVD RDLDASTALR FHFGELMLSV PWRAAQVRLI GVSPLGLALW QTLTLMEILF
HHSNLRLPFA LERRLCRLIV TPRMHGIHHS VVRGETDSNW STIFSWPDYL HGTVRLNVLQ
DNIDIGVVGY QDPAQLTLGK VLAMPFRPEI KAIAPEARRL SIPRTVLAP