Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3429 |
Symbol | |
ID | 8138796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3965387 |
End bp | 3966199 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644871046 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003023211 |
Protein GI | 253702022 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 0.210707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTTCA TCGAAACATC GGCCGGAGTC ACCCTTCACT ACCAGGAAAC GGGAGCCGGA CGCCCGGTGG TGTTCCTGCA CGGCTGGGCC ATGTCGGGGC GCGTCTGGCG CTTCCAGCAT TCACTCGACG ACGCCTATCG CCTCATCTTC TTCGACCAGC GCGGCCACGG ACAGTCGGCT ACCGCCGAGG GTTATACCAT CGACGACTAC GCGGGGGACG TGGCGGCGCT CTTTAGCCAG CTCGCTTTGG AAGATGCCGT CCTCATCGGC TGGTCCCTGG GGGTGCAGGT GGCGTTGCAG GCCTTTCCTT CCGTGAGGGA GAGGCTGGCC GGACTGGTGC TGGTGGGGGG GACCGCTCGT TTCACCACGG CGGACGACTA CCCGCACGGC AAACCTCCGG TCGACGTGAA GGGGCTGAGC CTCAAGCTGC GGCGCGACTA CCAAAAGACC ATGGGGGACT TCTTCAAGGG GATGTTCGCG GAAGGGGAGA TGGACCAGGC GCAGTACCAG CGGATCGTGC ACGAGATCGT GATGGGCGGC CGCTCCCCCG ACACCGAGGC GGCGAAGGAG TCGCTGAACA TTCTGGCGAC GGTTGACCAG CGGGACTTGC TGGCACAGGT GGACCGCCCG GTGTTGCTGG TGCACGGCGA GCTGGACACC ATCTGCCCCG CTGCGGCATC GGCCTACATG GCCGAGCGGA TGCCGCAGGC GAGGCTGGAA GTCGTACCCG GCTGCGGACA TGCGCCTTTC ATGACGCGCC CGGAGGGGTT CAACGCGCTG GTCAGGAATT TCATCGAGGG GTTGCAGCCG TAA
|
Protein sequence | MPFIETSAGV TLHYQETGAG RPVVFLHGWA MSGRVWRFQH SLDDAYRLIF FDQRGHGQSA TAEGYTIDDY AGDVAALFSQ LALEDAVLIG WSLGVQVALQ AFPSVRERLA GLVLVGGTAR FTTADDYPHG KPPVDVKGLS LKLRRDYQKT MGDFFKGMFA EGEMDQAQYQ RIVHEIVMGG RSPDTEAAKE SLNILATVDQ RDLLAQVDRP VLLVHGELDT ICPAAASAYM AERMPQARLE VVPGCGHAPF MTRPEGFNAL VRNFIEGLQP
|
| |