| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3401 |
|---|
| Symbol | |
|---|
| ID | 8138768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3932574 |
|---|
| End bp | 3933692 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644871018 |
|---|
| Product | CDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_003023183 |
|---|
| Protein GI | 253701994 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 136 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCGA TGGGCAATAA AAAACAGCAC CACTTCGATC CCGAATTCTT CCGCGGCAGG
CGGGTCCTGG TAACCGGCCA TACCGGTTTC AAGGGGAGCT GGCTCTCTCT TTGGCTGCAC
CGTCTGGGGG CGCAGGTGAC CGGCTACGCG CTCTCTCCGC CGACCGACCC GAGCCTCTTC
GAGCTGGCCG GCTTGGCGGA GCTGGTGCAC TCGGTGACCG GCGACGTGCG CGACCAGGCG
GCGCTTACAA CTGCCGTGAA GGACGCTGCC CCGGAGATCG TGATCCACAT GGCGGCGCAG
CCACTGGTGC GCGAGTCTTA CCTGAACCCG GTGGAGACCT ACTCGACCAA CGTGATGGGA
ACGGTGCACC TCTTGGAGGC GGTGAGAAAC TCTCCTGGCG TCAAGGCCGT CGTGAACGTC
ACCACCGACA AGTGCTACGA GAACCGCGAG TGGGCCTGGG GGTACCGCGA GAACGAGCCG
ATGGGGGGGT ACGATCCCTA CTCCAGCAGC AAGGGGTGCT CGGAACTCGT CACCGCCGCC
TATCGCAACT CCTACTTCAA CGAGACCCGC TATGCCGACC ACGGCGTGGC GCTCGCCTCG
GCCCGCGCCG GAAACGTCAT CGGCGGCGGC GACTGGGCGG GGGACCGCCT CATCCCCGAC
TGCGTTGCGG CCCTTTTGAA GCACGAGCCT GTGCGGATCA GAAACCCGCA CGCCATACGC
CCCTGGCAGC ACGTGCTGGA GCCCCTGTCC GGCTACCTGA CCCTGGCCCA GAGGCTGTAC
CAGGAGGGGC CGCGCTACGC CGGCGCCTGG AACTTCGGGC CCGGAGACGA CGATGCCCGC
GAAGTCGAAT GGATCGTTAA GAGGATGTGC AGCCGCTGGC AGGGCGAGGC CCGCTACGAG
GTGGACCAGG GGGAGCATCC GCACGAGGCG CACTACCTGA AGCTCGACTG CTCCAAGGCC
AAGGCGAAGC TGGGCTGGAG TCCGCGCTGG AGCCTGGAGA CTGCCATCGA GAAGATCATC
GACTGGTCCC TCGCCTATCA AAGAGGCGAC GAGCTGCGCG CGGTTTGCCT GCAGCAGATC
GACTCGTACT CTGCTGCGGG CGACGGTAAG CGCGCATGA
|
|---|
| Protein sequence | MISMGNKKQH HFDPEFFRGR RVLVTGHTGF KGSWLSLWLH RLGAQVTGYA LSPPTDPSLF
ELAGLAELVH SVTGDVRDQA ALTTAVKDAA PEIVIHMAAQ PLVRESYLNP VETYSTNVMG
TVHLLEAVRN SPGVKAVVNV TTDKCYENRE WAWGYRENEP MGGYDPYSSS KGCSELVTAA
YRNSYFNETR YADHGVALAS ARAGNVIGGG DWAGDRLIPD CVAALLKHEP VRIRNPHAIR
PWQHVLEPLS GYLTLAQRLY QEGPRYAGAW NFGPGDDDAR EVEWIVKRMC SRWQGEARYE
VDQGEHPHEA HYLKLDCSKA KAKLGWSPRW SLETAIEKII DWSLAYQRGD ELRAVCLQQI
DSYSAAGDGK RA
|
|---|
| |