Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3398 |
Symbol | |
ID | 8138765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3929343 |
End bp | 3930134 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644871015 |
Product | Transketolase domain protein |
Protein accession | YP_003023180 |
Protein GI | 253701991 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3959] Transketolase, N-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 137 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA GAAAGCTGAT CAAGAAATCA ATCATCCACA TGGTGCACCG GTCCCGCTCC TCACACGTGG GGAGCTGCCT CTCCGTGGCA GACATCCTGT ACCTGCTTTA CTTCAAGATC ATGAATGTCG ATCCTGAACG CCCTAACCTG CCGGGACGCG ACCGCCTCAT CCTCTCAAAG GGGCACGCCA GCGCCGCGTT GTACGCGACC TTGGCGCAGA GGGGCTACTT CCCGCAGGAG TACCTGGAGC GCTTCTACGT GGACGGGGGG CTCCTTCCCG GGCACCTGGA CATGGATGCC GTTCCCGGCG TGGATGCCTC GGCAGGGTCG CTCGGTCATG GGCTGTCGCT GGGAATCGGC ATGGCAATAG CGCAGCGCGG CAGCGCCTCG CCGGGCAGGG TCTTCGTGAT CCTGGGAGAC GGCGAGTGCA ACGAAGGTTC TGTCTGGGAA GGGGTGATGC TCGCCTCCAC GCTGGGGCTC TCCAACCTGA CCGCGATCGT CGACTACAAT AAGCTGCAGA GCTTCGGCAG GACCAACAAC GTAATCAACC AGGCCAACAT GTCGCAGCGT TGGGAGAGCT TCGGCTGGGA GGCCTGCGAC GTGGACGGCC ACGACCTAGA GGCGCTGGAG GCCGCTCTGC AAAAACCGCA ATCGGGGCCG AGGGTGCTGG TCGCCCACAC GGTGAAAGGA AAGGGAGTCT CCTTCATGGA GGACCGCTTG GAGTGGCATT ACAAGTCCCC CAACGACGAC CAACTGGAAC AGGCACTGAC CGAATTGGAA GGATTGGCAT GA
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Protein sequence | MTERKLIKKS IIHMVHRSRS SHVGSCLSVA DILYLLYFKI MNVDPERPNL PGRDRLILSK GHASAALYAT LAQRGYFPQE YLERFYVDGG LLPGHLDMDA VPGVDASAGS LGHGLSLGIG MAIAQRGSAS PGRVFVILGD GECNEGSVWE GVMLASTLGL SNLTAIVDYN KLQSFGRTNN VINQANMSQR WESFGWEACD VDGHDLEALE AALQKPQSGP RVLVAHTVKG KGVSFMEDRL EWHYKSPNDD QLEQALTELE GLA
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