Gene GM21_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3398 
Symbol 
ID8138765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3929343 
End bp3930134 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID644871015 
ProductTransketolase domain protein 
Protein accessionYP_003023180 
Protein GI253701991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3959] Transketolase, N-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones137 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA GAAAGCTGAT CAAGAAATCA ATCATCCACA TGGTGCACCG GTCCCGCTCC 
TCACACGTGG GGAGCTGCCT CTCCGTGGCA GACATCCTGT ACCTGCTTTA CTTCAAGATC
ATGAATGTCG ATCCTGAACG CCCTAACCTG CCGGGACGCG ACCGCCTCAT CCTCTCAAAG
GGGCACGCCA GCGCCGCGTT GTACGCGACC TTGGCGCAGA GGGGCTACTT CCCGCAGGAG
TACCTGGAGC GCTTCTACGT GGACGGGGGG CTCCTTCCCG GGCACCTGGA CATGGATGCC
GTTCCCGGCG TGGATGCCTC GGCAGGGTCG CTCGGTCATG GGCTGTCGCT GGGAATCGGC
ATGGCAATAG CGCAGCGCGG CAGCGCCTCG CCGGGCAGGG TCTTCGTGAT CCTGGGAGAC
GGCGAGTGCA ACGAAGGTTC TGTCTGGGAA GGGGTGATGC TCGCCTCCAC GCTGGGGCTC
TCCAACCTGA CCGCGATCGT CGACTACAAT AAGCTGCAGA GCTTCGGCAG GACCAACAAC
GTAATCAACC AGGCCAACAT GTCGCAGCGT TGGGAGAGCT TCGGCTGGGA GGCCTGCGAC
GTGGACGGCC ACGACCTAGA GGCGCTGGAG GCCGCTCTGC AAAAACCGCA ATCGGGGCCG
AGGGTGCTGG TCGCCCACAC GGTGAAAGGA AAGGGAGTCT CCTTCATGGA GGACCGCTTG
GAGTGGCATT ACAAGTCCCC CAACGACGAC CAACTGGAAC AGGCACTGAC CGAATTGGAA
GGATTGGCAT GA
 
Protein sequence
MTERKLIKKS IIHMVHRSRS SHVGSCLSVA DILYLLYFKI MNVDPERPNL PGRDRLILSK 
GHASAALYAT LAQRGYFPQE YLERFYVDGG LLPGHLDMDA VPGVDASAGS LGHGLSLGIG
MAIAQRGSAS PGRVFVILGD GECNEGSVWE GVMLASTLGL SNLTAIVDYN KLQSFGRTNN
VINQANMSQR WESFGWEACD VDGHDLEALE AALQKPQSGP RVLVAHTVKG KGVSFMEDRL
EWHYKSPNDD QLEQALTELE GLA