Gene GM21_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3395 
Symbol 
ID8138762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3925704 
End bp3927167 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content66% 
IMG OID644871012 
ProductrfaE bifunctional protein 
Protein accessionYP_003023177 
Protein GI253701988 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones131 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAA GAGAGGTGGA ATCCTTTTTC GAGCGGGCCG CTTCGATACG GGCACTGGTT 
GTCGGCGACC TGATGCTGGA CGAGTACCTC TGGGGGCGGG CGGAGCGGAT CTCGCCGGAG
GCCCCGGTGC AGGTGGTCGA GGTGGCCAGC GAAGATCTCC GTCTCGGCGG CGCCGGCAAC
GTGGTCAACA ACTTGGCCGC CCTGGGATGC CAGGTCAGCG TCTGCTCGGT GATAGGGAGC
GACGAAAACG GCGCGCTCCT GCGCCGCGCC CTTGAGGAGA AGGGGGCGGG ACTGGAAGGG
CTCTTCGAGG AAGGCGAGAG AAAGACCAGC AAGAAGACTC GCGTACTCGC GGCGAACCAG
CAGATCGTCA GGATCGACCG GGAGACCAAG TCCTCGATAG CCGCCGCCAG CGAAGAGGGG
ATCATCGATT ACCTGTCGGC CCGATGCGGT GACTTCGACG TCATCGTGGT CTCGGATTAC
CTGAAGGGGG TTCTGACCCC GGCGGTCCTC TCGGCGGTCT GCAGCCGCGG CCGCGCGCTG
GGTATCCCGG TGGTGGTCGA CCCCAAGGGG GACGACTACG TCAAGTACCG CGGCGCCACC
ATACTCACCC CCAACCGCAA GGAGGCCGAA ATCGCCGCGG GTGTCGCCAT CACGGACCAG
GAGTCTCTGC AGCGCGCGGC GACGGGGCTT TTATCCTGCC TGGAGCTGGA CGCGCTCCTC
ATCACGCGCA GCGAGGCGGG GATGTCGCTC TTCCCGGCGG CCGGGGGGGC GGTCCATATC
CCGACCGTGG CCCGCGAGGT CTTCGACGTG ACCGGCGCAG GGGATACCGT GATCTCCGTC
CTCTCGCTGG GTCTTGCCTG CGGCCTCACC ATGGCTGACG CCGCCTGGGT CGCCAACGTC
GCGGCGGGGA TCGCGGTCGG CAAACTCGGT ACCTCGACGG TCGCCCCGCA GGAGATCGTC
GCGGAGGTGG GGCACGGCGC GAAGGACAGC GACTCCAAGA TCAAGAACCT GGACGTCTTG
GCGCACGCCA TAGCCCGGGA GCGCTCGCGC GGCAAGAAGG TGGTCTTCAC CAACGGCTGC
TTCGACCTTT TGCACGTGGG GCACGTGAAG TACCTGCAAA AGGCGAGGGG GCTCGGGGAC
ATCCTGGTGG TGGGGCTCAA CACCGACGCC TCGGTCCGCC GTCTTAAGGG GGAGAAGCGA
CCCCTCATCG AGGAGACGGA GCGGGCCCAC ATCCTGGCGG CGCTCGACTG CATCGACTAC
GTGGTGCTCT TCGACGAGGA TACGCCCTTA AACGTGATCG AGACGCTCAC GCCGGACATC
CTGGTGAAGG GGGGCGACTA CAGCATCGAA GGTGTGGTCG GGCGCGAGGT GGTGGAGGCC
CACGGGGGCC GCGTTGAGTT GATCCAGTTC GTAGACGGCA GGTCCACCAG CCGCATCATC
GAGAAGATCC TTTCCTCGTA CTGA
 
Protein sequence
MERREVESFF ERAASIRALV VGDLMLDEYL WGRAERISPE APVQVVEVAS EDLRLGGAGN 
VVNNLAALGC QVSVCSVIGS DENGALLRRA LEEKGAGLEG LFEEGERKTS KKTRVLAANQ
QIVRIDRETK SSIAAASEEG IIDYLSARCG DFDVIVVSDY LKGVLTPAVL SAVCSRGRAL
GIPVVVDPKG DDYVKYRGAT ILTPNRKEAE IAAGVAITDQ ESLQRAATGL LSCLELDALL
ITRSEAGMSL FPAAGGAVHI PTVAREVFDV TGAGDTVISV LSLGLACGLT MADAAWVANV
AAGIAVGKLG TSTVAPQEIV AEVGHGAKDS DSKIKNLDVL AHAIARERSR GKKVVFTNGC
FDLLHVGHVK YLQKARGLGD ILVVGLNTDA SVRRLKGEKR PLIEETERAH ILAALDCIDY
VVLFDEDTPL NVIETLTPDI LVKGGDYSIE GVVGREVVEA HGGRVELIQF VDGRSTSRII
EKILSSY