Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3395 |
Symbol | |
ID | 8138762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3925704 |
End bp | 3927167 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644871012 |
Product | rfaE bifunctional protein |
Protein accession | YP_003023177 |
Protein GI | 253701988 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 131 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGAA GAGAGGTGGA ATCCTTTTTC GAGCGGGCCG CTTCGATACG GGCACTGGTT GTCGGCGACC TGATGCTGGA CGAGTACCTC TGGGGGCGGG CGGAGCGGAT CTCGCCGGAG GCCCCGGTGC AGGTGGTCGA GGTGGCCAGC GAAGATCTCC GTCTCGGCGG CGCCGGCAAC GTGGTCAACA ACTTGGCCGC CCTGGGATGC CAGGTCAGCG TCTGCTCGGT GATAGGGAGC GACGAAAACG GCGCGCTCCT GCGCCGCGCC CTTGAGGAGA AGGGGGCGGG ACTGGAAGGG CTCTTCGAGG AAGGCGAGAG AAAGACCAGC AAGAAGACTC GCGTACTCGC GGCGAACCAG CAGATCGTCA GGATCGACCG GGAGACCAAG TCCTCGATAG CCGCCGCCAG CGAAGAGGGG ATCATCGATT ACCTGTCGGC CCGATGCGGT GACTTCGACG TCATCGTGGT CTCGGATTAC CTGAAGGGGG TTCTGACCCC GGCGGTCCTC TCGGCGGTCT GCAGCCGCGG CCGCGCGCTG GGTATCCCGG TGGTGGTCGA CCCCAAGGGG GACGACTACG TCAAGTACCG CGGCGCCACC ATACTCACCC CCAACCGCAA GGAGGCCGAA ATCGCCGCGG GTGTCGCCAT CACGGACCAG GAGTCTCTGC AGCGCGCGGC GACGGGGCTT TTATCCTGCC TGGAGCTGGA CGCGCTCCTC ATCACGCGCA GCGAGGCGGG GATGTCGCTC TTCCCGGCGG CCGGGGGGGC GGTCCATATC CCGACCGTGG CCCGCGAGGT CTTCGACGTG ACCGGCGCAG GGGATACCGT GATCTCCGTC CTCTCGCTGG GTCTTGCCTG CGGCCTCACC ATGGCTGACG CCGCCTGGGT CGCCAACGTC GCGGCGGGGA TCGCGGTCGG CAAACTCGGT ACCTCGACGG TCGCCCCGCA GGAGATCGTC GCGGAGGTGG GGCACGGCGC GAAGGACAGC GACTCCAAGA TCAAGAACCT GGACGTCTTG GCGCACGCCA TAGCCCGGGA GCGCTCGCGC GGCAAGAAGG TGGTCTTCAC CAACGGCTGC TTCGACCTTT TGCACGTGGG GCACGTGAAG TACCTGCAAA AGGCGAGGGG GCTCGGGGAC ATCCTGGTGG TGGGGCTCAA CACCGACGCC TCGGTCCGCC GTCTTAAGGG GGAGAAGCGA CCCCTCATCG AGGAGACGGA GCGGGCCCAC ATCCTGGCGG CGCTCGACTG CATCGACTAC GTGGTGCTCT TCGACGAGGA TACGCCCTTA AACGTGATCG AGACGCTCAC GCCGGACATC CTGGTGAAGG GGGGCGACTA CAGCATCGAA GGTGTGGTCG GGCGCGAGGT GGTGGAGGCC CACGGGGGCC GCGTTGAGTT GATCCAGTTC GTAGACGGCA GGTCCACCAG CCGCATCATC GAGAAGATCC TTTCCTCGTA CTGA
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Protein sequence | MERREVESFF ERAASIRALV VGDLMLDEYL WGRAERISPE APVQVVEVAS EDLRLGGAGN VVNNLAALGC QVSVCSVIGS DENGALLRRA LEEKGAGLEG LFEEGERKTS KKTRVLAANQ QIVRIDRETK SSIAAASEEG IIDYLSARCG DFDVIVVSDY LKGVLTPAVL SAVCSRGRAL GIPVVVDPKG DDYVKYRGAT ILTPNRKEAE IAAGVAITDQ ESLQRAATGL LSCLELDALL ITRSEAGMSL FPAAGGAVHI PTVAREVFDV TGAGDTVISV LSLGLACGLT MADAAWVANV AAGIAVGKLG TSTVAPQEIV AEVGHGAKDS DSKIKNLDVL AHAIARERSR GKKVVFTNGC FDLLHVGHVK YLQKARGLGD ILVVGLNTDA SVRRLKGEKR PLIEETERAH ILAALDCIDY VVLFDEDTPL NVIETLTPDI LVKGGDYSIE GVVGREVVEA HGGRVELIQF VDGRSTSRII EKILSSY
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