| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3390 |
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| Symbol | |
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| ID | 8138757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3921038 |
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| End bp | 3922585 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644871008 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_003023173 |
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| Protein GI | 253701984 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 121 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATAG AGATGCGCCA GCAGATGAAA ATGAGTCAGC AACTGGTGAT GACGCCCCAG
TTGCAGCAGG CCATCAAGCT CCTCCAGCTT TCCCGGCTGG AGTTGCAGGA CGTAGTACGT
CAGGAGTTGG AGGAGAACCC CATACTCGAC GAGGTGATCG AGCAGGAGGA GATCCGGGAA
CCCGAGCAGA TCGAATTGCG CGAGAAGGAA GCCGAGCCGG AGGCCGCCGC GAGCGATTTC
CAGGAAGTGC GGGCCGGCGA GGAGACGCGC GAGGCGGACT GGGATTCCTA CATAGACGGC
TACAACTACA GCTCCGGCGA GCAGTACTAC GACGACGAGG ACCGTCCCTC CTTCGAGAAC
CTTCTCACCA AGAAATCCAC CCTGTTCGAC CACCTGATGT GGCAGTTGAG CCTCACCCGT
CTCACGGAGC GCGAGATGGC GGTGGGAGCC GAGATCATCG GCAACATCGA CGAGGAGGGG
TACCTCCGCG CCTCCCTCGA GGACGTAGCG TCGGCCTGCG TGCAGGTAAC CCCGTTCCAG
GAAGAGATGC TCGAGTGGTC GGGGCTTACC AGCGACGCCT GCGAGGAAGA GATAGCCGAT
GCGGCGGGCG GTTTCTCCAC TACCGTGCTG GTTCCGCTGG TCGATTCGGT GCTGAAGCGG
ATCCAAGAGT TCGACCCGGT GGGCGTCGGG GCCCGCGACC TGCGCGAGTG CCTCCTGATC
CAGGTGGGTA GCCTCGGCAT GGGGGGGAGC CTCGTGGAGT CGCTGTTGCG CGACCACCTG
AAGGATCTGG AGAGCCACAA GTACAAGCAG GCCGCGAAGG TGCTGGGGGT GGATGTGAAC
GACATCCTCG CCGCCACGAG GATCATCGCG GAACTCGATC CCAAGCCCGG CCGGGTCTTC
GGCAGCGACG ACGTGCAGTA CATCTCGGCC GACATCTTCG TGCACAAGGT GGGTGACGAG
TACGTGGTGA TGCTGAACGA CGAGGGGATG CCCAACTTGA GGATCAACCC CATCTACGCC
CCCGAGGCGA AGAGCAGCCG TCCGGTCGAC AAGGTGGCCG AGGATTACAT CGGCGAGAAG
ATGCGCTCCG CCCTGTGGCT CATCAAGAGC ATCCAGCAGC GCCAGCGCAC CATCTTCAAG
GTGGCCAAGA GCATCGTGAA GTTCCAGCGC GACTTTCTCG ACCGCGGCAT CGAGCATCTG
CGCCCGCTGG TGTTGAGGGA CATCGCCGAG GACATCGGCA TGCACGAGTC CACCATCAGC
CGGGTCACCA CCAACAAATA CATGCAGACC CCGCAAGGGC TCTTCGAGCT GAAGTACTTC
TTCAACTCCG GCATCTCGAC CGGGGAGGGG GACTTCATCG CCTCCGAGAG CGTGAAGAGC
AAGATCAAGG AACTGGTGGA CAACGAGGAC TCCAAGCGCC CCTACAGCGA TCAGCGCCTG
GCGGAACTCC TCTCGGACCA CAACATCGTC ATCGCCCGCC GCACCGTTAC CAAGTATCGC
GAGATGCTTC GCATCGGCTC GTCCTCGGAG CGCAAGAAGC ATTTCTAA
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| Protein sequence | MAIEMRQQMK MSQQLVMTPQ LQQAIKLLQL SRLELQDVVR QELEENPILD EVIEQEEIRE
PEQIELREKE AEPEAAASDF QEVRAGEETR EADWDSYIDG YNYSSGEQYY DDEDRPSFEN
LLTKKSTLFD HLMWQLSLTR LTEREMAVGA EIIGNIDEEG YLRASLEDVA SACVQVTPFQ
EEMLEWSGLT SDACEEEIAD AAGGFSTTVL VPLVDSVLKR IQEFDPVGVG ARDLRECLLI
QVGSLGMGGS LVESLLRDHL KDLESHKYKQ AAKVLGVDVN DILAATRIIA ELDPKPGRVF
GSDDVQYISA DIFVHKVGDE YVVMLNDEGM PNLRINPIYA PEAKSSRPVD KVAEDYIGEK
MRSALWLIKS IQQRQRTIFK VAKSIVKFQR DFLDRGIEHL RPLVLRDIAE DIGMHESTIS
RVTTNKYMQT PQGLFELKYF FNSGISTGEG DFIASESVKS KIKELVDNED SKRPYSDQRL
AELLSDHNIV IARRTVTKYR EMLRIGSSSE RKKHF
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