Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3389 |
Symbol | |
ID | 8138756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3920430 |
End bp | 3920978 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644871007 |
Product | sigma 54 modulation protein/ribosomal protein S30EA |
Protein accession | YP_003023172 |
Protein GI | 253701983 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 121 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAA CCGTGACGTT CAGACACATG GAGCCGAGCG ATGCTCTGAA GAGCTACGCA GAGGAAAAAC TGGAGCGGGT TAAGAAATAT ATAGACGAGC CGATCGTCGT CCAGGTATTT TTGACCGTTG AGAAGATCCG TCACATGGCC GAGGTAACCA TCACCGCCAA GGGGATCACC ATCAAGGCCG CGGAAGAAAC CAACGACATG TACGCCTCCA TAGACGCCGT CTCCGACAAG ATCGAGCGCC AGCTGCGCCG CTTCAAGGAG CGCATCAAGG CCCACAAGCC CGCTCCCGAC GCCCGCGAGC GCCAGGTGCA AAAGAGCATC GTCGAGGCCC AGAGCATCGA GGAGGGGGCG CAGGCCCCGG TCATCATCAA GACCAAGAGC TTTTCCATGA AGCCCATGTC CGTCGAGGAA GCCGTGATGC AGATGGAACT TCTGCACAAG GATTTCCTGG TCTACACCGA GTCCTCCACC GAGAAGATCA ACGTGGTGTA CCGCAGGAAA GACGGCAACT ACGGCCTGAT CTCCCCGGAA AACGCCTGA
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Protein sequence | MQTTVTFRHM EPSDALKSYA EEKLERVKKY IDEPIVVQVF LTVEKIRHMA EVTITAKGIT IKAAEETNDM YASIDAVSDK IERQLRRFKE RIKAHKPAPD ARERQVQKSI VEAQSIEEGA QAPVIIKTKS FSMKPMSVEE AVMQMELLHK DFLVYTESST EKINVVYRRK DGNYGLISPE NA
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