| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3388 |
|---|
| Symbol | |
|---|
| ID | 8138755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3919329 |
|---|
| End bp | 3920279 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644871006 |
|---|
| Product | HPr kinase/phosphorylase |
|---|
| Protein accession | YP_003023171 |
|---|
| Protein GI | 253701982 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
|---|
| TIGRFAM ID | [TIGR00679] Hpr(Ser) kinase/phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 119 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA GCATCAAGGA TCTTCTGGAA GACAAGGCCT ACGGCCTGGA CCTGCAGCTT
CTCTGCGGCG AAGAGGGGCT GGCGAACCGT CTCTACAGTT CCCGCATCCA GAAACCGGGG
CTCGCGCTCA CCGGGTACAC GGAGCACCTG CACCCGGACC GGGTCCAGGT ACTGGGCAAC
ACCGAGATCT CCTATCTGAG CCAGATCCCC GAGGAAGTGG GAAGCCGGCA CATCGAGAAG
CTCTGCAGCT ACCCCATCGC CTGCTTCATC GTCACCAAGG GGCTCGATCC CCCCGAATTC
CTGAAGAAGA GCGCCCAGGA CGCCGGGATC CCGCTTCTGG GCACGCACCA CCAGTCCTCC
ACCTTCATCT CCCTCATCAC CAAGTTCCTG GAGGAGAGCC TGCTCCCCTC GACCCACATC
CACGGCGTGC TGGTAGACGT CCTTGGGGTG GGGGTGCTGC TCTTAGGCAA GAGCGGCATA
GGCAAGAGCG AGTGCGCCCT CGACCTGGTG ATCCGCGGAC ACCGGCTGGT CGCCGACGAC
GTGATCCACA TCAAGAAGAA GATGCCGGCG GCCCTGGTCG GGCAGGCGGG AGAGTCGATC
CAGTACCACA TGGAGATCCG GGGCTTAGGG ATCATCAACG TGAAGGACCT CTACGGGGTT
TCCTCCATCC GGGAAAAGAA GATCATCGAC ATGGTCCTGG AGCTTATGGA GTGGGACGCA
AGCCAGGAGT ACGAGCGCCT GGGGATCGAC GAGCCGGTGA AGACCATCTT GGGCGTGGAC
CTGCCGCACC TGAAGATCCC GGTACGCCCG GGGCGCAACC TCACCTCCAT CATCGAGGTG
GCCGCGAGGA ACTTCCTCCT GAAGGGGATG GGGTACCACT CCGCCCGGGA ATTCCACGAA
AAGCTCCTGG CCCGCCTGGA GTTCCGCCCG CTGGGCAACG AGGTGGAATA G
|
|---|
| Protein sequence | MSLSIKDLLE DKAYGLDLQL LCGEEGLANR LYSSRIQKPG LALTGYTEHL HPDRVQVLGN
TEISYLSQIP EEVGSRHIEK LCSYPIACFI VTKGLDPPEF LKKSAQDAGI PLLGTHHQSS
TFISLITKFL EESLLPSTHI HGVLVDVLGV GVLLLGKSGI GKSECALDLV IRGHRLVADD
VIHIKKKMPA ALVGQAGESI QYHMEIRGLG IINVKDLYGV SSIREKKIID MVLELMEWDA
SQEYERLGID EPVKTILGVD LPHLKIPVRP GRNLTSIIEV AARNFLLKGM GYHSAREFHE
KLLARLEFRP LGNEVE
|
|---|
| |