Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3382 |
Symbol | |
ID | 8138749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3913697 |
End bp | 3915118 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644871000 |
Product | hopanoid biosynthesis associated radical SAM protein HpnJ |
Protein accession | YP_003023165 |
Protein GI | 253701976 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 107 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGT TGTTTCTGAA CCCGCCGACC TTCGAGGACT TCGACGGGGG GGCCGGTGCG CGCTACCAAG CCTCCCGCGA GGTTACCTCC TTCTGGTTTC CCGGCTGGCT TACCTACCCC GCAGGGATGA TCCCCGGAGC CCGGGTCGTG GATGCCCCGG TGCAGCGGCT TGACCTCGAT GCCTGCCTCA ACATCGCGAA AGAATACGAC ATGGTGGTGA TGTACACCTC CACCCCGACC CTTGCCATCG ACGTCGAAAC CGCCCGTCGC CTGAAAGCCC AGAACCCCGC CACCGTCACC GTCCTGACCG GCCCCCACGT AAGCGTCCTC CCCGAGGAAT CGCTTCGCTT CGCCGCCGGC GCCGTCGACA TAGTCTGCCG CGGCGAGTTC GACTACTCCA CCAAGGAGCT TTGCGAAGGG AAGCCGCGTG CGGAGGTGGA CGGCATCAGC TTTCTGCAGG ACGGCAAGGT GGTCCATACC AAGGACCGCC CCCCCATCGC CGACCTCGAC AGCCTCCCCT TCGCAAGCCA GGTCTACCAC CGCGACCTTC CCATCGAGGA ATACGTCATC CCGCATTTTC GGCATCCGTA CGTCTCCATC TACGCCTCCC GCGGCTGCCC CTCCCGCTGC ATCTACTGCC TGTGGCCCCA GACCTTCTCC GGGCGGACCC TGAGGAAGAG GAGCCCGCAG AACGTCTACG AGGAGGTGCG CTGGATCAAG GAGAACCTCC CCCAGGTGAA GGAGATCTCC TTCGACGACG ACACCTTCAC CGCCGACCGC GAGCACGCGA AAGCGATCGC CCGGGCCATC AAGCCGCTCA ACGTCTCCTG GGTGATCAAC GCGCGGGCCA ACTGCGACTA CGAGACGCTC AAGGAGTTGC GCGACGCCGG GATGCACCAC GTGGTGGTCG GCTACGAGAC TGGGAACGAA GAGATCCTGA AGAACATCAA GAAGGGGGTC ACCAAGGCGC AGGCGATAGA GTTCACCCGC AACTGCCACA AGTTAGGCCT CACCATACAT GGCGCCTTCG TCCTGGGGCT CCCCGGGGAG ACCAGGGAGA CCATCAAGGA AACCATCGCC TACGCCATAG ATCTCAACCT CACCTCGATC CAGGTCTCGC TCGCCTCCCC CTATCCCGGC ACCGAGTTCT ACGACATGGC GGTGCGGGAG GGTTGGATCG CCTCGGACAG CTTCCTGGAC GCCAGCGGGC ACCAGAAATG CGTCATCAAC TACCCCGACC TCTCGAACCG GGAGATCTTC GACGCGGTAG AGCTCTTCTA CAACAAGTTC TATTTCCGCC CCCGCTACAT CGCGCGCAGC CTCTACAGCA TGCTGGTCGA CTCCGCCCAG CGCAAGAAGC TCCTCAAGGA GGGGGCGCAG TACCTGAGCT ACATGAGAAA GCGCAAGCAG GCCTGCGCCT AA
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Protein sequence | MKPLFLNPPT FEDFDGGAGA RYQASREVTS FWFPGWLTYP AGMIPGARVV DAPVQRLDLD ACLNIAKEYD MVVMYTSTPT LAIDVETARR LKAQNPATVT VLTGPHVSVL PEESLRFAAG AVDIVCRGEF DYSTKELCEG KPRAEVDGIS FLQDGKVVHT KDRPPIADLD SLPFASQVYH RDLPIEEYVI PHFRHPYVSI YASRGCPSRC IYCLWPQTFS GRTLRKRSPQ NVYEEVRWIK ENLPQVKEIS FDDDTFTADR EHAKAIARAI KPLNVSWVIN ARANCDYETL KELRDAGMHH VVVGYETGNE EILKNIKKGV TKAQAIEFTR NCHKLGLTIH GAFVLGLPGE TRETIKETIA YAIDLNLTSI QVSLASPYPG TEFYDMAVRE GWIASDSFLD ASGHQKCVIN YPDLSNREIF DAVELFYNKF YFRPRYIARS LYSMLVDSAQ RKKLLKEGAQ YLSYMRKRKQ ACA
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