| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3371 |
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| Symbol | |
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| ID | 8138738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 3904101 |
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| End bp | 3905726 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644870989 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
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| Protein accession | YP_003023154 |
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| Protein GI | 253701965 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTC CAGAGTTCAA GTACCAGGAA GCCTTCCCGC TCGGACCGGA CAGCACGAAG
TACCGCCTGA TCCCCGATTC CAAGCAGTAC GTATCGGTGG CCAACTTCGA GGGGCAGGAG
ATCCTCAGGG TGGCGCCCGA GGCGCTCACC ATCGCGGCCA ACGCCGCAAT GAAGGACCTC
TCCTTCATGC TGCGCCCGGA GCACAACGAG CAGGTTGCCA AGATCCTTGC CGACCCGGAA
GCATCGCAAA ACGACAAGGG TGTCGCCCTC GCTTTCCTGA GAAACGCGGA GGTCGCAGCG
CAGCTCGAAC TTCCCATCTG CCAGGACACC GGCACCGCCA TCGTCATGGG GAAGAAAGGG
CAGCAGGTCT GGACCGGCGT CAACGACGAG GAGTACCTCT CCAAGGGGGT CTACAAGACC
TACACCGAGG AGAACCTGCG CTACTCCCAG ACCGTGGCTC TCGACATGTA CAAGGAGATC
AACACCGGCA CCAACCTCCC GGCCCAGATC GACGTCTACG CCACCAAAGG GGCCGAGTAC
AAGTTCCTCT TCATGGCCAA GGGGGGCGGC TCCGCCAACA AGACCTACCT CTACCAGGAG
ACCAAGGCGC TCCTTAACCC GGACAGCCTG ATCAAATTCC TGGTCGCCAA GATGAAGACC
CTGGGGACCG CGGCCTGCCC GCCGTACCAC TTGGCCTTCG CCATCGGCGG CACCTCAGCC
GAGGCGTGCC TTAAGACCGT GAAGCTCGCC AGCGCCAAGT ACCTCGACGC GCTCCCCACC
TCCGGCAACG ACGGCGGCCA GGCGTTCCGC GACGTCGAGC TCGAGCAGCA GCTCCTCAAG
GCGGCCCAGG AATCCGGCAT CGGCGCGCAG TTCGGCGGCA AGTACTTCGC CCACGACGTG
CGCATCGTCC GCCTGCCCCG CCACGGCGCC TCCTGCCCGG TCGGCATGGG GGTTTCCTGT
TCCGCCGACC GCAACATCAA GGCTAAGATC AACAAGGAAG GGATCTGGGT CGAGCAGATG
GACGACAACC CGGGCCGCCT GATCCCCGAG CGTTTCCGCG GCAAGCACGA GCACGGCGTC
AGGATCAACC TGAACCAGCC GCTCAAGGAC GTACTGGCCG AGCTGACCAA GCACCCGGTC
TCCACTCCGC TGCTCCTCTC CGGCACCATC GTGGTCGGCC GCGACATCGC CCACGCCAAG
TTCAAGGAGA TCCTCGACTC CGGCAAGCCG CTTCCCGAGT ACCTGAAGAA TCATCCGATC
TACTACGCGG GCCCGGCGAA AACCCCGAAA GGGAAACCCT CCGGCTCCTT CGGCCCCACC
ACCGCCGGCC GCATGGACTC CTACGTCGAC CTCTTGCAGG AAAACGGCGG CTCCATGATC
ATGATCGCCA AGGGCAACCG CTCCCAGCAG GTCACCGACG CCTGCAAGAA GCACGGCGGC
TTCTACCTGG GCTCCATCGG CGGCCCGGCT GCCATCCTGG CCGAGGAGAA CATCAAGAAG
GTCGAGTGCA TCGACTTCCC CGAGCTCGGC ATGGAAGCGG TCTGGAAGAT AGAGGTTGAG
GACTTCCCGG CGTTCATCCT GGTGGACGAC AAGGGGAACG ACTTCTTCAA GCAGCTGGGA
ATCTAG
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| Protein sequence | MATPEFKYQE AFPLGPDSTK YRLIPDSKQY VSVANFEGQE ILRVAPEALT IAANAAMKDL
SFMLRPEHNE QVAKILADPE ASQNDKGVAL AFLRNAEVAA QLELPICQDT GTAIVMGKKG
QQVWTGVNDE EYLSKGVYKT YTEENLRYSQ TVALDMYKEI NTGTNLPAQI DVYATKGAEY
KFLFMAKGGG SANKTYLYQE TKALLNPDSL IKFLVAKMKT LGTAACPPYH LAFAIGGTSA
EACLKTVKLA SAKYLDALPT SGNDGGQAFR DVELEQQLLK AAQESGIGAQ FGGKYFAHDV
RIVRLPRHGA SCPVGMGVSC SADRNIKAKI NKEGIWVEQM DDNPGRLIPE RFRGKHEHGV
RINLNQPLKD VLAELTKHPV STPLLLSGTI VVGRDIAHAK FKEILDSGKP LPEYLKNHPI
YYAGPAKTPK GKPSGSFGPT TAGRMDSYVD LLQENGGSMI MIAKGNRSQQ VTDACKKHGG
FYLGSIGGPA AILAEENIKK VECIDFPELG MEAVWKIEVE DFPAFILVDD KGNDFFKQLG
I
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