| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3351 |
|---|
| Symbol | |
|---|
| ID | 8138718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3877753 |
|---|
| End bp | 3878772 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644870969 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_003023134 |
|---|
| Protein GI | 253701945 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.0830053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC TTTGGAATGT GGCAGTGGTA GGCGCGACCG GCGCGGTCGG AACCCAGATG
ATCGAGTGCC TGGAGGAGCG GAAGTTCCCG GTGGGAAAGA TAAAGTTCCT GGCCAGCGCC
CGCAGCGCAG GGAAGGTCCT TGAGTTCAAC GGCAAGCCCG TGCCGGTGGA AGAGCTGAAA
CACGACTCCT TCGAGGGGAT CGACATTGCC CTCTTCTCCG CAGGGGGCGC GCGCTCCGAG
GAGTTCTGCC CCTCCGCCGC CAAGGCTGGC GCTGTCTGCA TCGACAACTC CAGCGCCTGG
CGCATGGACC CGGAGGTGCC GTTGGTGGTC CCCGAGGTGA ACCCCCACGC GCTTGCCGGC
TACCGCAAGA AGGGAATCGT CGCCAACCCC AACTGCTCCA CCATCCAGAT GGTGGTCGCC
TTGAAGCCCC TGCACGACTT CGGGTCCATC AAGCGGATCG TCGTCTCCAC CTACCAGGCG
GTTTCCGGCA CCGGCAACAA GGCGATCGAC GAGCTGCGCA AGCAGACCGG AGAGCTTTTG
AACGGGCGGC CGCCCAAGAA CGAGGTCTAT CCGCACCGGA TCGCCTTCAA CTGCCTGCCG
CAAATCGATT CCTTCTGCGA CAACGGTTAC ACCAAGGAAG AGATGAAGAT GGTGAACGAG
ACCCGGAAGA TCATGGAGGC GGACATCAAG ACCACCGCCA CCTGCGTCAG GGTTCCCGTC
TTCTACGGGC ATTCCGAGTC GGTGAACGTA GAGACCGCGA AGAAGATCAC CGTGGCCAAG
GCGCGCGAGC TATTGGAAGA CGCGCCCGGC GTGGAACTGG TCGACAACCC CGCCAACGGC
GAGTATCCGA TGGCGATGGA CGCCGCGGGC GAGGACCTGA CCCTCGTAGG TCGCATCCGC
GAGGACGCCA CCGTCGCCAA CGGACTCAAC CTCTGGATCG TCGCCGACAA CCTCAGGAAG
GGCGCCGCCA CTAACGCAGT GCAGATCGCG GAGCTGCTGG TGGATGAGTA CCTGAAGTAA
|
|---|
| Protein sequence | MKKLWNVAVV GATGAVGTQM IECLEERKFP VGKIKFLASA RSAGKVLEFN GKPVPVEELK
HDSFEGIDIA LFSAGGARSE EFCPSAAKAG AVCIDNSSAW RMDPEVPLVV PEVNPHALAG
YRKKGIVANP NCSTIQMVVA LKPLHDFGSI KRIVVSTYQA VSGTGNKAID ELRKQTGELL
NGRPPKNEVY PHRIAFNCLP QIDSFCDNGY TKEEMKMVNE TRKIMEADIK TTATCVRVPV
FYGHSESVNV ETAKKITVAK ARELLEDAPG VELVDNPANG EYPMAMDAAG EDLTLVGRIR
EDATVANGLN LWIVADNLRK GAATNAVQIA ELLVDEYLK
|
|---|
| |