Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3343 |
Symbol | |
ID | 8138706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3868491 |
End bp | 3869681 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644870957 |
Product | elongation factor Tu |
Protein accession | YP_003023126 |
Protein GI | 253701937 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.00311584 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTAAAG CTAAATTCGA AAGAACTAAA CCGCATGTGA ACATAGGGAC CATCGGTCAC GTCGACCACG GCAAGACCAC CCTGACCGCA GCAATCACCA AGGTACTCGC AGGCAAAGGC CAGGCCGAGT TCAAGGCGTT CGACCAGATC GACAACGCAC CGGAAGAGCG CGAGCGCGGT ATCACCATCG CGACCGCCCA CGTCGAGTAC GAGACCGACA AGCGTCACTA CGCTCACGTC GACTGCCCGG GCCACGCCGA CTACGTAAAG AACATGATCA CCGGCGCGGC GCAGATGGAC GGCGCGATCC TGGTTGTTTC CGCAGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC CTGCTCGCAC GTCAGGTTGG CGTCCCCTAC ATCGTCGTGT TCCTGAACAA GGCCGACATG GTGGACGACG AGGAACTCCT CGAGCTGGTC GAGCTGGAAG TTCGCGAACT CCTCTCCTCC TACGACTTCC CGGGCGACGA TATCCCGATC ATCAAGGGTT CCGCTCTTAA AGGCCTCGAA GGCGACGCCG GCGAGCTGGG CGAGCAGGCC ATCATGAAAC TGATGGAAGC TGTCGACACC TACATCCCGG AGCCGGTTCG CGCCATCGAC AAGCCGTTCC TGATGCCGGT CGAAGACGTT TTCTCCATCT CCGGTCGCGG TACCGTCGCA ACCGGTCGTG TCGAGCGCGG CATCGTGAAG GTCGGCGAGG AGGTCGAGAT CGTCGGCATG AAGGCCACCG CGAAGACCAC CGTCACCGGC GTCGAGATGT TCCGTAAGCT CCTCGACGAA GGTCGCGCAG GCGACAACAT CGGCGCGCTG CTGCGCGGCG TGAAGCGTGA AGAGATCGAG CGCGGCCAGG TTCTCTCCAA GCCCGGCTCC ATCACCCCGC ACACCAAGTT CAAGGCAGAA GCCTACATCC TCTCCAAAGA GGAAGGCGGC CGTCACACCC CGTTCTTCAA CGGCTACCGT CCGCAGTTCT ACTTCAGGAC CACCGACGTG ACCGGCGTGG TCGACCTCGA GGCAGGCGTC GAGATGGTTA TGCCGGGCGA CAACGTCTCG GTGACCGTCA ACCTGATCAC CCCGATCGCC ATGGACGAAG GTCTGCGCTT CGCGATTCGC GAAGGCGGCC GTACCGTCGG CGCCGGTGTC GTAGCCTCCA TCATCGAGTA A
|
Protein sequence | MAKAKFERTK PHVNIGTIGH VDHGKTTLTA AITKVLAGKG QAEFKAFDQI DNAPEERERG ITIATAHVEY ETDKRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI LLARQVGVPY IVVFLNKADM VDDEELLELV ELEVRELLSS YDFPGDDIPI IKGSALKGLE GDAGELGEQA IMKLMEAVDT YIPEPVRAID KPFLMPVEDV FSISGRGTVA TGRVERGIVK VGEEVEIVGM KATAKTTVTG VEMFRKLLDE GRAGDNIGAL LRGVKREEIE RGQVLSKPGS ITPHTKFKAE AYILSKEEGG RHTPFFNGYR PQFYFRTTDV TGVVDLEAGV EMVMPGDNVS VTVNLITPIA MDEGLRFAIR EGGRTVGAGV VASIIE
|
| |