| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3333 |
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| Symbol | rpsL |
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| ID | 8138695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3855856 |
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| End bp | 3856227 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644870946 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_003023116 |
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| Protein GI | 253701927 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1.70711e-17 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCCAACTA TTAATCAGCT TATTCGTCAT GGTCGGGAGT CAAAGGGTGA TAAATCCACT
GCTCCGGCAC TCAGGAGCTG CCCGCAGAAG AGGGGCGTTT GCACCAGGGT TTACACCACA
ACCCCGAAGA AACCGAACTC CGCACTCCGC AAGGTGGCGA GGGTAAGGCT TACCAACGGC
GTTGAGGTGA CCTCCTACAT TCCCGGTGTT GGTCACAACC TCCAGGAACA CTCCGTCGTC
CTGATCAGGG GCGGCAGGGT CAAGGACCTT CCGGGTGTTC GTTACCACAT CGTCCGCGGC
ACGCTCGACT CCGTCGGCGT CAAGGGTCGG ATGAAGAGTC GTTCGAAGTA CGGGGCCAAA
AGACCCAAGT AA
|
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| Protein sequence | MPTINQLIRH GRESKGDKST APALRSCPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
VEVTSYIPGV GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG TLDSVGVKGR MKSRSKYGAK
RPK
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