Gene GM21_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3333 
SymbolrpsL 
ID8138695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3855856 
End bp3856227 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content58% 
IMG OID644870946 
Product30S ribosomal protein S12 
Protein accessionYP_003023116 
Protein GI253701927 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1.70711e-17 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCAACTA TTAATCAGCT TATTCGTCAT GGTCGGGAGT CAAAGGGTGA TAAATCCACT 
GCTCCGGCAC TCAGGAGCTG CCCGCAGAAG AGGGGCGTTT GCACCAGGGT TTACACCACA
ACCCCGAAGA AACCGAACTC CGCACTCCGC AAGGTGGCGA GGGTAAGGCT TACCAACGGC
GTTGAGGTGA CCTCCTACAT TCCCGGTGTT GGTCACAACC TCCAGGAACA CTCCGTCGTC
CTGATCAGGG GCGGCAGGGT CAAGGACCTT CCGGGTGTTC GTTACCACAT CGTCCGCGGC
ACGCTCGACT CCGTCGGCGT CAAGGGTCGG ATGAAGAGTC GTTCGAAGTA CGGGGCCAAA
AGACCCAAGT AA
 
Protein sequence
MPTINQLIRH GRESKGDKST APALRSCPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG 
VEVTSYIPGV GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG TLDSVGVKGR MKSRSKYGAK
RPK