Gene GM21_3328 details

Gene Information

• Locus tag: GM21_3328
• Symbol: rplC
• ID: 8138690
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3850935
• End bp: 3851570
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644870941
• Product: 50S ribosomal protein L3
• Protein accession: YP_003023111
• Protein GI: 253701922
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.00000000000000332976
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAATAAGG GATTGATTGG TAAAAAGCTG GGGATGACCC AGATATTCGC CGAAGATGGC 
AGGCGCATCG CTGTGACCGT CGTCGAGGCT GGGCCGTGTG TCGTCGTCCA GAAGAAGAGC 
GTGGCAAAGG ACGGCTACTC CGCCATACAG GTCGGTTTAG GAGCGAAGGA CGCCTCCAGG 
GCGAACGCTG CACAGATCGG GCACTGCAAA GGTGCCGGCG CTGGCGTGTT CACCCACTAC 
CGCGAGCTGC GCATGGACAA CACGGACGCC TACAATCTGG GCGACGTGAT CGAGGCCGCG 
GTTTTCGAGG AAGGTGACCT GGTCGACGTG ACCGGCACCT CCATCGGTAA GGGCTTTGCC 
GGCGTCATCA AGCGCTGGGG CTTCAAAGGC GGGCGGTCGA GCCACGGCTC CCGTTTCCAC 
CGCGCCCCGG GCTCCATTGG CTGCTCCGCG ACCCCCTCCA GGGTTTTCAA GAACAAGAAG 
ATGCCGGGCC AACTCGGTAA CGAGAAGGTG ACCGTGCAGC GCCTCAAGGT GGTTCGCGTT 
GACGCTGCTG ACAATCTGAT TCTGCTCGGT GGAGCGATCC CCGGTTCCGC CAACGGCGTC 
GTCCTGATCA AGGACTCCGT CAAGGCGAAG AAATAA 

 

Protein sequence

MNKGLIGKKL GMTQIFAEDG RRIAVTVVEA GPCVVVQKKS VAKDGYSAIQ VGLGAKDASR 
ANAAQIGHCK GAGAGVFTHY RELRMDNTDA YNLGDVIEAA VFEEGDLVDV TGTSIGKGFA 
GVIKRWGFKG GRSSHGSRFH RAPGSIGCSA TPSRVFKNKK MPGQLGNEKV TVQRLKVVRV 
DAADNLILLG GAIPGSANGV VLIKDSVKAK K