Gene GM21_3313 details

Gene Information

• Locus tag: GM21_3313
• Symbol: rplF
• ID: 8138675
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3844459
• End bp: 3844998
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644870926
• Product: 50S ribosomal protein L6
• Protein accession: YP_003023096
• Protein GI: 253701907
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 0.000000000224387
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTCTAGAA TAGGAAAACT TCCCATCGCG ATTCCTGCGG GGGTGAAAGT CATATACAAC 
GCCCCGGAGA TCAAGGTGGA GGGCCCGAAA GGGAAACTCG CCCGCAACAT CGGGGAAGGC 
GTCGCCATCG ATGTGACCGC GCAGGCGATC ACGGTGACCA GGAACGACGA CACCATCAAG 
TCCCGCTCGG CCCACGGCCT GACCAGGACC CTGATCAACA ACATGGTGGT CGGCGTCTCC 
AAAGGGTTCG AGACCCTGCT CGAGATCAAC GGCGTCGGTT ACCGCGCCGA GGTGAAGGGC 
AACGTGCTGA ACCTGGCCCT GGGCTTCTCG CACCCGGTCA ACTTCGAGCT TCCGGCCGGC 
ATCACGGTCG AGGTCGAGAA GATGACCAAG CTCAAAGTAA TGGGCATCGA CAAGGAGATG 
GTCGGCGAGA CCGCCGCCAA GATCCGCGCG TTCCGTCCGC CCGAGCCGTA CAAGGGGAAG 
GGTGTCAAGT ACGCTGACGA AACGATTCTG AGAAAAGCCG GCAAGACCGG TAAAAAATAG 

 

Protein sequence

MSRIGKLPIA IPAGVKVIYN APEIKVEGPK GKLARNIGEG VAIDVTAQAI TVTRNDDTIK 
SRSAHGLTRT LINNMVVGVS KGFETLLEIN GVGYRAEVKG NVLNLALGFS HPVNFELPAG 
ITVEVEKMTK LKVMGIDKEM VGETAAKIRA FRPPEPYKGK GVKYADETIL RKAGKTGKK