| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3301 |
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| Symbol | |
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| ID | 8138663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3837501 |
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| End bp | 3838520 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644870914 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_003023084 |
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| Protein GI | 253701895 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.0109844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATAGAA ACTGGCGCGA TCTGATCAGA CCTAAGAAGC TCCAGGTTGA GACGGAATCG
CTCACAAATA CATACGGGAA GTTCTTTGCC GAACCCTTCG AAAGGGGCTT CGGCACCACC
CTGGGAACAG GTCTGCGTCG GGTCCTCATC TCGAGCCTGC AGGGGGCAGC CATCGTCTCC
GTGAAGGCGA AGGGCGTACT GCACGAGTTC TCCGCAGTCC CGGGCGTGAC CGAGGACATG
ACGGACATCA TTCTGAACCT CAAGGGTGTG CGCCTCAAAG TGCACGGCAA CGAGTCCAGG
ATGATCAGGA TCGTCCAGAA GGGCGAAGGT GTGGTCAAGG CCAAGGACAT CATCACGGAC
AACAACGTGG AGATCCTGAA CCCCGAGCAC CACATCGCGA CCTGCTCCAA GGACGCGAAC
CTCGAGATGG ACCTCATGGT CAAAGTCGGC AAAGGGTACG TCCCCGCTGA CCGCAACCGT
GACGAGAAGG CTCCGGTCGG GACCATCCCC ATCGACGCGA TCTTCTCCCC GGTCCACAAG
GTGAACTTCA CCGTAACCAA CGCTCGCGTA GGTCAGATCA CCGACTACGA CAAGCTCACC
ATCGAGCTCT GGACCGACGG CAGCGTCAAG CCGCAGGACG CCGTGGCCTA CGCTTCCAAG
ATCCTCAAGG ACCAGCTTTC CATCTTCATC AACTTCGATG AGGACGTGGA GCCCCAAGAG
GAGGCGGAAC CGGAGGAGGA GCGCGAGCGC TTCAACGAGA ACCTGTACCG CTCAGTGGAC
GAGCTGGAAC TCTCGGTTCG CTCCGCGAAC TGCCTGAAGA ACGCAGGGAT TAAGCTGATC
GGCGAACTCG TTTCCAGAAG CGAAGCCGAG ATGCTTAAGA CCCAAAACTT CGGCAGGAAA
TCTCTGAACG AAATCAAGGA CATCCTCGTC GACATGGGCC TCACCCTCGG CATGAAACTG
GAGAATTTTC CGGATCCCGA GATCATGAGG CGCCTGCGCG GCGAGCAGAA AGAAGAATAG
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| Protein sequence | MYRNWRDLIR PKKLQVETES LTNTYGKFFA EPFERGFGTT LGTGLRRVLI SSLQGAAIVS
VKAKGVLHEF SAVPGVTEDM TDIILNLKGV RLKVHGNESR MIRIVQKGEG VVKAKDIITD
NNVEILNPEH HIATCSKDAN LEMDLMVKVG KGYVPADRNR DEKAPVGTIP IDAIFSPVHK
VNFTVTNARV GQITDYDKLT IELWTDGSVK PQDAVAYASK ILKDQLSIFI NFDEDVEPQE
EAEPEEERER FNENLYRSVD ELELSVRSAN CLKNAGIKLI GELVSRSEAE MLKTQNFGRK
SLNEIKDILV DMGLTLGMKL ENFPDPEIMR RLRGEQKEE
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