Gene GM21_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3299 
Symbol 
ID8138661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3833177 
End bp3836707 
Gene Length3531 bp 
Protein Length1176 aa 
Translation table11 
GC content64% 
IMG OID644870912 
Productchromosome segregation protein SMC 
Protein accessionYP_003023082 
Protein GI253701893 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.207651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA AGAGACTGGA AATACACGGC TTCAAATCCT TTCAGGACAA GGCCGTCCTG 
GACTTCAACC AGCCGATAAC CGGGGTGGTC GGACCCAACG GCTGCGGCAA GTCCAACGTC
GTCGACGCCA TCCGCTGGGT CATGGGGGAG CAGTCCGCCA AGAACCTGCG CGGCAAGTCG
ATGGAGGACA TCATCTTCGG CGGCACCGAG TTCAGGAAAC CGCTCGGCAT GGCCGAGGTT
TCCCTGTTCT TCTCCACCGA GGACGGCCGC GTCCCCGCAA AATACCTCAA CTTTTCCGAG
ATCCAGGTCA CCCGCCGCCT CTACCGCGAC GGCGACAGCG ATTACCTGCT GAACAAGACC
CCCTGTCGGC TGCTGGACAT CGCCGAGCTC TTCATGGACA CCGGCATCGG AGCCAAGGCC
TACTCGATCA TCGAGCAGGG GAAGATCGGG ATGATCCTGC ACGCCAAGCC CGAGGAGCGC
CGCTTCCTGA TCGAGGAAGC CGCCGGGGTC ACCAAGTTCA AGGCGCGCAA GGTAGTTGCC
ATGAAGAAGA TGGAGGCTAC CCGCCAGAAC CTGCTGCGCT TGGGCGACAT CATCTCCGAG
ATCAAACGCC AGATGAACGG CCTGCAGCGC CAGGCGAAGA AGGCTGAGCG CTTCCGTGAG
ATACGGCTTG AACTAAAAGA GATCGAGCTG CTCTTCGCCG CCAAGGGGTA CGGCTCGGTG
CAGAAGGAAC GGCAGGGGCT GGAGCGCGAG ATCGCGGAAC TTGAGTCCAA GCTGGTCGAC
GTGACTGCGC GGCTGAATGA AGCTGAGCTT TCCATTGAAG GCAAAAGGAT AACCCTGCTG
GAGACCGAGC GCGCGTTGAC CGCCGCCCAG GAGGAGATCT TTCGCTGGAG GAGCGAGCTG
CAGGGTGGGG AGAACAAGCT TGAATTCCAG CGGCGGGAAC TTGCCAACCA GGAGCGCCAC
GGCGCGAGGT TCGAGGAGGA ACTCCAGGGG CTCCGCGACC AGTTGGCCGC CTCGGAGCGT
GAGCTCGGTT CGCTGGAGGC ACAGCAGACC TCCTTCCTTG AGGAGCACGC ACGCGAGGGC
GAGGCGCTCG AACACCGTGA GGCGCTCTTA GAGGAGATGG CGGCGAGCGA GGCTGGAGTC
ACCCGCGAAC TGGACGAGGC CCGCCGCGCC ATGTTCGCGG CACTCTCCGA GGGGGCGCAG
GCGAACAACC AGCATGCCGC AGCCGTCAAA AGGCTCGCCT CAATAGACGA GCGCCTGCAG
GCAAGCCAAA GGGAGCGCGT GCTTCTCGGG GAGCGGCTGT TCGAGTCGAA CGGGAAGGTG
GACGCGCTCA AAGCCGAGCG TGAACAGTTG GCCCGGGAAA AAGAGCTGCT GGACGAGGAA
CTGACGCTTG CCGGAAGCCG CGAGGCGGAG CTCAAGCAGG CGCAGGAGGC GGGGGAGAAG
CTGCTGCAGC AACTGCGCGA CCAGCTTTCC TCCGCGTCGT CGAGGCTTAA ATCGCTTCAG
GAACTGGAGG CCCAGTTCGC CGGGTACGGG CAGGGGGTGA AGAACCTGCT CCTGGCCGAC
TCGTTCAAGG GCGCACCGTT TACCATGCTG GCCGACGCCA TCGAGGTCGA GGAGGAGTTC
GAGGTGGCGC TGGAAAGCGT GCTGGGTGAG CGCCTGCAGT ACCTTCTCTG CGGCTCGCCG
GACCTGGCTC TCGATGCGGT CCTGCACCTC AAGGGAAACT ACGGCGGGCG CTGCAGCTTC
ATCACCGCCC CTCCTTGGCA TCACCCGGGT GATAGGCCTT CCGGCGCCGC GCCGCTTTGG
GAGCGGGTCA CCGTCCCCGC GCAGCACGCG CAGCTGGTCG AGCCGCTACT CTCTGGCGCC
TATCTCGCGC GTGACTTGGC GCACGCACTG GAACTTGCCG CCTCCTTCCC CCATGCTACC
TTCGTCACGG TCGAGGGGGA CTTGGTCCAT GGCGGCGGTA TCCTGAACGG GGGCTCCGCC
GAACCGGCAC AGCAGGGGAT CATCCACAAA AAGCGCGAGA TCAAAGGGCT GGGAGCCGAC
GTGGAGCGTC TCACCGGCGA AGTTCAGCAG CTGACTGAGG CTCGCGAAAC CAGAAGGGTA
GAGATCGCCG AGGCCGAGGC GCACCGGCTC GAACTGCGCC AGTCGTTGCA TCGCCTGGAG
ATCAGGGTGC TCAATGCCGA AAAGGATCTT CAGTCCGCGC AGGCCGAGTG CCGCAGGCTA
GAGGAGAATG CCGCCGTCCG CGAGATGGAG GAGGAGCAGT TCTCCGAAGA GAAGGACCTG
GTCGCCAAGG AGATCTCCCA GGCGGAAAAC CGGCGGGGCG AAGCCGAGGA GCGCAAGCTC
GCCCTGGAGA AGAACGTCGA GGCGCTGCAA GGACGCCTGG AAGGATCGCG TTTCGAGATG
GAGGAGGCGC GTGAGATGGT TACCTCTCTC AAGGTGCGAG TCGCCGCGCT CAAGGAGAAG
GGGGAGTCCA CCCAGCGCGC CTACCGTCGC GTCGAGGCGC TTTGCGCCGA CCTTGCCAGC
CGGATCGCCT CCCGCGGCAA CGAGCTTGAG GGCTCGGGTG CCGAGCGCAC CCGCCTGATC
GCGGCCATCG CAGCGGGCGA GGAGGCGCTG CGCGACATCG TGAAGCAGCA GCTTGCCAGC
GAGCAGGCAT TGCTCGTGGT GAAAGAGCGC TACGAGACGG AGGCGGCAAC GGTTCAGGAG
GAGGAACTTC GCCTGAAGGG AACCCGCAGC GAGGCCTCGC TTTTGCGGGA CCAGCTAAAC
GCCAAGAGCC TGCGGCTCAC CGAGGTCAGC ATGCGGCTCT CCCATCTGGA GGAGACCTTG
CGCGAGAAGC ACCGCATGGA GATCGCCGAC GCCCTTTTGA ACTACTCCAA GGTGGAGTGG
GACGAGGAGG AGCGCGCGGC GCGCCAGGCC GAGCTGCAAA AGGCGATCAA CGAGATGGGC
GAGGTCAACC TGATGGCGAT CGAGGAGTTC AAGGAGATGG AGGAGCGCTT CTCCTTCCTT
TCCAGCCAGA AGGACGATCT GGAAGAATCG ATGAACGCCC TGCAGAAGGC TATCCAGCGC
ATCAACCGCA CCACCCGGAA GCGTTTCCTC GAAACCTTCC AGCTGGTGAA CGAGAAGTTC
CAGACCATCT TCCCGAGGCT TTTCTGCGGC GGTCACGCAG AACTGCGCCT GACCGACGAG
GAGGACCTGC TCAACACGGG GCTCGACATC GTGGTCCAAC CTCCGGGCAA GAAGCTGCAG
AACGTGTCGC TTCTCTCCGG CGGGGAGAAG GCGCTCACTG CAGTCGCCCT GATCTTCTCC
ATCTTCCTGA TCAAGCCCTC GCCCTTCTGT CTGCTGGACG AGGTCGACGC GCCGCTGGAC
GACGCCAACA TCGGCAGGTT CAACGACATG GTGCGCGAGA TGAGCGCCAA CTCGCAGTTC
ATCATCATCA CCCACAACCG CGCCACCATG GCAGTGGCCG ACACCCTCTA CGGGGTCACC
ATGGAGGAGC CGGGCGTCTC GAAGTTGGTA TCGGTACGGC TCAACCGCTA G
 
Protein sequence
MKIKRLEIHG FKSFQDKAVL DFNQPITGVV GPNGCGKSNV VDAIRWVMGE QSAKNLRGKS 
MEDIIFGGTE FRKPLGMAEV SLFFSTEDGR VPAKYLNFSE IQVTRRLYRD GDSDYLLNKT
PCRLLDIAEL FMDTGIGAKA YSIIEQGKIG MILHAKPEER RFLIEEAAGV TKFKARKVVA
MKKMEATRQN LLRLGDIISE IKRQMNGLQR QAKKAERFRE IRLELKEIEL LFAAKGYGSV
QKERQGLERE IAELESKLVD VTARLNEAEL SIEGKRITLL ETERALTAAQ EEIFRWRSEL
QGGENKLEFQ RRELANQERH GARFEEELQG LRDQLAASER ELGSLEAQQT SFLEEHAREG
EALEHREALL EEMAASEAGV TRELDEARRA MFAALSEGAQ ANNQHAAAVK RLASIDERLQ
ASQRERVLLG ERLFESNGKV DALKAEREQL AREKELLDEE LTLAGSREAE LKQAQEAGEK
LLQQLRDQLS SASSRLKSLQ ELEAQFAGYG QGVKNLLLAD SFKGAPFTML ADAIEVEEEF
EVALESVLGE RLQYLLCGSP DLALDAVLHL KGNYGGRCSF ITAPPWHHPG DRPSGAAPLW
ERVTVPAQHA QLVEPLLSGA YLARDLAHAL ELAASFPHAT FVTVEGDLVH GGGILNGGSA
EPAQQGIIHK KREIKGLGAD VERLTGEVQQ LTEARETRRV EIAEAEAHRL ELRQSLHRLE
IRVLNAEKDL QSAQAECRRL EENAAVREME EEQFSEEKDL VAKEISQAEN RRGEAEERKL
ALEKNVEALQ GRLEGSRFEM EEAREMVTSL KVRVAALKEK GESTQRAYRR VEALCADLAS
RIASRGNELE GSGAERTRLI AAIAAGEEAL RDIVKQQLAS EQALLVVKER YETEAATVQE
EELRLKGTRS EASLLRDQLN AKSLRLTEVS MRLSHLEETL REKHRMEIAD ALLNYSKVEW
DEEERAARQA ELQKAINEMG EVNLMAIEEF KEMEERFSFL SSQKDDLEES MNALQKAIQR
INRTTRKRFL ETFQLVNEKF QTIFPRLFCG GHAELRLTDE EDLLNTGLDI VVQPPGKKLQ
NVSLLSGGEK ALTAVALIFS IFLIKPSPFC LLDEVDAPLD DANIGRFNDM VREMSANSQF
IIITHNRATM AVADTLYGVT MEEPGVSKLV SVRLNR