| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3297 |
|---|
| Symbol | |
|---|
| ID | 8138659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3831531 |
|---|
| End bp | 3832760 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644870910 |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_003023080 |
|---|
| Protein GI | 253701891 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0552] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGG AAAACAGGGG CTTTTTCAAG GGACTGCTGA AGAAACTCGG TGTGGGGTCC
GCAGAGGAAC CCGCGCCCGC TGAGGATGAA GCGAAACAGG AAGGCGAGCT GGGCCGCACG
CATACGGCCG AGGAGCAGCA GGCCCCGGTA CAGCTCCCGC AGCTGGAGCA GGCAGCACCG
GTTGCGCCGC CCGAGCCTCC CGCTCCGGCG GAACCGGCAC GCTCTCCCTA TGTCGAGCCC
CCTGCCCCGG CGCAGCGCCC TGCGTGGCAT GAACCTGCCG TCGCGGTGCC GCCTCCCCCC
GAGCCCGAGG GCGCTAAACC CAGCTTCTTC GAGCGCCTGA AAAAAAGCCT GAGCAAGACC
CACGAGAGCA TCGTCGGCCG GGTGGACACG CTGCTTTTGG GGAAGAAGCA GATCGATACG
GACACTCTTG AGGAGCTCGA GGAGATCCTG ATCACGGCCG ACCTCGGGGT GAAGACCACC
GTGGACCTGA TCCGGACCCT GGAGCAGCGC CTCAAAAGGG ACGAGCTTCA GGACGGAGAG
GCCCTGAAGA AGGCGCTGAA GGAGGAGATC CAACTGCGCC TGATGGCCCA TGCCGCGCCC
CTTGTGGTTA CCGACAAGAA GCCCTTCGTG ATCCTGGTGA TCGGCGTGAA CGGCGTCGGC
AAGACCACGA CCATCGGGAA GCTTGCTGCC CGCTACGCAG GGGAGGGGAA GAAGGTTCTC
CTAGCCGCAG CGGACACCTT CCGTGCCGCT GCAGCCGAAC AGCTTGAACT GTGGTCGCAG
CGCGTCGGCG CCGACATCGT GCGCCATAAG GAGGGGGCGG ATCCCTCCGC CGTCGTCTTC
GACGCCTGCA AGGCGGCCGT TGCGCGCGGC ACCGATGTCC TCATCATCGA CACGGCTGGA
CGGATGCACA CCAAGGTGAA TCTCATGGAG GAGATGAAGA AGATCCGCCG CGTGCTCACC
CGCGAGATCC CCGATGCTCC GCACGAGACG CTTTTGGTGC TCGACGCCGC CACGGGCCAA
AACGCCCTGT CCCAGGCGAA GCTCTTCAAG GAGGCCGCTT TCGTCTCCGG CGTGGTTCTC
ACCAAGCTCG ACGGCAGCGC CAAGGGGGGG GTAGTGGTAG CGGTGAGTAA TGAGTACGCG
CTTCCGGTTC GATTCATTGG CGTGGGTGAG TCGGTTGAGG ACCTCCGGGA GTTCGATCCG
GTCCAGTTCG TGGAGGCTCT TTTCCAATAA
|
|---|
| Protein sequence | MAEENRGFFK GLLKKLGVGS AEEPAPAEDE AKQEGELGRT HTAEEQQAPV QLPQLEQAAP
VAPPEPPAPA EPARSPYVEP PAPAQRPAWH EPAVAVPPPP EPEGAKPSFF ERLKKSLSKT
HESIVGRVDT LLLGKKQIDT DTLEELEEIL ITADLGVKTT VDLIRTLEQR LKRDELQDGE
ALKKALKEEI QLRLMAHAAP LVVTDKKPFV ILVIGVNGVG KTTTIGKLAA RYAGEGKKVL
LAAADTFRAA AAEQLELWSQ RVGADIVRHK EGADPSAVVF DACKAAVARG TDVLIIDTAG
RMHTKVNLME EMKKIRRVLT REIPDAPHET LLVLDAATGQ NALSQAKLFK EAAFVSGVVL
TKLDGSAKGG VVVAVSNEYA LPVRFIGVGE SVEDLREFDP VQFVEALFQ
|
|---|
| |