| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3285 |
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| Symbol | |
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| ID | 8138642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3815758 |
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| End bp | 3817308 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644870894 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003023069 |
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| Protein GI | 253701880 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 115 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC GATTGCGCAT ACTGCATCTA GAGGACGATC CGATGGATGC CGAACTCGTC
TTGATGGCTC TTACCGCAGA GGGACTCGAT TGTGAGGTCC AGGTGGTGTC GAGGCGGGAT
GAGTTCGACA AGGCGTTGCA GCGCGGGGGA ATGGACCTCA TTCTTGCCGA CTTTGCGCTC
CCTGCCTTTG ATGGGATGAG CGCCTTGGCC ATGGTCCGGG CCAAGCTTCC TGATCTTCCA
TTCGTCTTTG TCTCGGGCAA GCTTGGTGAA GAGGCGGCGA TCGAGTCGCT TAAAAGCGGT
GCCACTGACT ACGTGCTCAA AAGCAGGCTG TCCAGGCTGG GGCCGGCGGT ACAAAGGGCG
CTCACTGAGG CGACGGAGCG AGCGAAACAA CGCCAAACTG AAAAGGCGCT GGAGATAGCA
TATGCTGAGA TAGAGAAGCG GGCGGAGGAC TACCGCAACC TCTTCAACAG CATCAGGGAC
GTCATCGTGG TGGCGGATCA CAACCGGACC ATCCTGCATG TCAACCAACC GGCACTCATG
GACACGTTTG GCTACAGTTC CGGCGAGGTG GTAGGAGAAA GCAGCATCAT CCTCTACGCG
AATGAGGATG ACTTTCACAG CACCGGGAAA GAGGTCTTCG ATGTCGAGGG ACCGGTGGAC
GGGAAACTAA TAGAGCTGAA CTTCCGCAGG AAAGGCGGCG AAACTTTCAT CGGCGAACTT
TATGCGATGA AAAGGCTGGA CCGGCACGGC GTGGTAACCG GCAACATCTC GATCTTCAGG
GATATCAGCC AGCGCAAGAA AGCTGAGGCA GATCTCAGGG AGAGTGAACT GCGCCGCTAC
CAACTGCAGT TGGAACTGGT ATATGCCGCG GAAATTCAGG CAAAGCTATT GCCGCGCAGC
TATCCTAATA TCCCAGGTTT CGACGTGAGC GCGAGATGTC TGCCGGCAAA ACAGGTGGGT
GGGGACTTCT ACGACTGGCA GCAGGTAACC CCCACCGTTT TCAACCTCAC TCTCGGTGAC
GTGATGGGCA AGGGGATGGC GGCGGCCATG CTGATGGCGA CAGTCAGGGC CGCGCTCCAT
GCCGTCACGC TTTACAACGC GCCCGCCCAG GCGGTGCACC TGGCGGAAAA GGCGCTCAAC
GAGGATCTGG AGAATTCCGA GAGCTTCGTT ACCCTTTTCC ATGCCCAACT CGACTCAGTT
AAACGTACCC TTTCCTTTGT GGATTGCGGT CACGGCTATG TCTTTGTCAG GAGAGCCAAC
GGTGCGGTGG AGACCCTCTC CCCGAGAGGG CTTCCCCTGG GGGTGCAGGT GGGGGAAGTT
TACCAGGAAG GTAACCTACT GTTCGAAAAG GGGGATGTAT TTGTCCTTTA CAGCGATGGG
CTCATCGACG CCAACCCGCA GCTTGAGTTG ACCCATGAGA TACTTGCCGA GCATATTACG
GGTGAGGAGA GCGCGCTCGA TACGGTGGAT CGCCTTATCG CTCTGACCCG GCAGCCTGAC
CCGCAGCCTG ACGACATAAC CGTTCTGGTG GCGAGGTTTA CGGGCGGGTA A
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| Protein sequence | MTQRLRILHL EDDPMDAELV LMALTAEGLD CEVQVVSRRD EFDKALQRGG MDLILADFAL
PAFDGMSALA MVRAKLPDLP FVFVSGKLGE EAAIESLKSG ATDYVLKSRL SRLGPAVQRA
LTEATERAKQ RQTEKALEIA YAEIEKRAED YRNLFNSIRD VIVVADHNRT ILHVNQPALM
DTFGYSSGEV VGESSIILYA NEDDFHSTGK EVFDVEGPVD GKLIELNFRR KGGETFIGEL
YAMKRLDRHG VVTGNISIFR DISQRKKAEA DLRESELRRY QLQLELVYAA EIQAKLLPRS
YPNIPGFDVS ARCLPAKQVG GDFYDWQQVT PTVFNLTLGD VMGKGMAAAM LMATVRAALH
AVTLYNAPAQ AVHLAEKALN EDLENSESFV TLFHAQLDSV KRTLSFVDCG HGYVFVRRAN
GAVETLSPRG LPLGVQVGEV YQEGNLLFEK GDVFVLYSDG LIDANPQLEL THEILAEHIT
GEESALDTVD RLIALTRQPD PQPDDITVLV ARFTGG
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