| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3281 |
|---|
| Symbol | miaA |
|---|
| ID | 8138638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3811424 |
|---|
| End bp | 3812344 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644870890 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_003023065 |
|---|
| Protein GI | 253701876 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 108 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGGATA TCGATAAAAA GATCAAGGTC ATCGTCCTTG GAGGAGCCAC CGGTTCCGGC
AAGAGCGATC TCGCGGTGAG ACTGGCGGAA GAGATCGGCG GAGAAATCGT CAATGCGGAC
TCCATGCAGG TCTATCGCAG GCTCGATATC GGGACGGCCA AGCCCTCCGC TGAAGACCTG
GCCCGCGTTC CCCACCACCT GATCGATATC CTCGATCCGG ATGAGGAGTT CACCGCCTCG
GAATTCAGAC GCGAGGCCGC AGCTGCCATC GCGGACATTC AGAGCAGGGG GAAAAGGGCC
ATCGTTGTCG GGGGGACCGG GCTGTACATA CGCGCCCTGC TGCACGGGTT GGTGGACTCT
CCCACAGGTG ACCCGGAATT GCGCCGACAG TTTGCCGACG TTCCGGGCGA GGAACTGCTG
AGGCGACTGT CACTGGTTGA TCCGGAGACT GCGGCGCGCC TGTACCCTAA CGACAGGGTA
CGCCTGATAC GGGCGCTGGA GGTGTACGCA CAGACTGGGC GCCCCATTTC TGCTTTCCGC
TCGGAGCATA CTTTCTCGGA GGTTCACTAC CAAGCGCTCA AAATGGCAAT TCGGGTGGAA
CGGCAGGAAT TGTACCGCCG CATAGACCTC AGGGTCGAGA AGATGCTCGA TGATGGGCTG
GTCGAAGAGG TCCGCTCGCT GCTGGCCGCG GGGTACGGGC GGGAGTTGAA AACTATGCGC
TCAATCGGCT ATAAGGAAGT AACCGCTTAT CTGGCAGGGG AAATGACGCT GGATGAAGCA
GTTACCCTCA TAAAAAGAGA CACGAGGCGC TATGCCAAAC GGCAGATGAC ATGGTTCGGC
AAGGAAAATG ATATTTATTG GCTTGAATAT CCCGGAAGTT TTGCTACTAT CCTTGGACAT
GTGATTGAAT TTCTTGCGTA A
|
|---|
| Protein sequence | MQDIDKKIKV IVLGGATGSG KSDLAVRLAE EIGGEIVNAD SMQVYRRLDI GTAKPSAEDL
ARVPHHLIDI LDPDEEFTAS EFRREAAAAI ADIQSRGKRA IVVGGTGLYI RALLHGLVDS
PTGDPELRRQ FADVPGEELL RRLSLVDPET AARLYPNDRV RLIRALEVYA QTGRPISAFR
SEHTFSEVHY QALKMAIRVE RQELYRRIDL RVEKMLDDGL VEEVRSLLAA GYGRELKTMR
SIGYKEVTAY LAGEMTLDEA VTLIKRDTRR YAKRQMTWFG KENDIYWLEY PGSFATILGH
VIEFLA
|
|---|
| |