| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3255 |
|---|
| Symbol | |
|---|
| ID | 8138612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3785553 |
|---|
| End bp | 3786020 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644870864 |
|---|
| Product | Peptidylprolyl isomerase |
|---|
| Protein accession | YP_003023039 |
|---|
| Protein GI | 253701850 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 117 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACG TAGAGAAGTT CATCGTCGTT TTGCTGCTCC TGGCAGCAGT AGCCATTCCC
GCATGTTCCC AGAAAGAGGC GCAGCCGGTG ACGGAAAAGG CCGCCGAGAG TAAGGCCCCC
GCCGGCGCGA CGGTGACTGC TTCCGGGCTC TCCTATACAG ATATCGTGCA AGGTACCGGC
GCCGCTCCCA CCTCGGGGAA GATGGTGACC GTGCATTACA CGGGCGTTTT GGAAAACGGC
ACCAAGTTCG ACAGCTCCGT CGACCGCGGC CAGCCCTTCA GCTTCCGCAT CGGTGCGGGC
GAGGTGATCC CCGGGTGGGA CGAAGGTGTC ATCTCCATGA AGGTCGGCGG CAAAAGGAAG
CTGGTCATCC CGCCGCAGCT AGGTTACGGC ACGGCAGGGG CCGGCGGGGT GATTCCCCCG
AACGCCACCC TGATCTTCGA TGTGGAACTG CTGGACGTAG AGAAGTAG
|
|---|
| Protein sequence | MRNVEKFIVV LLLLAAVAIP ACSQKEAQPV TEKAAESKAP AGATVTASGL SYTDIVQGTG
AAPTSGKMVT VHYTGVLENG TKFDSSVDRG QPFSFRIGAG EVIPGWDEGV ISMKVGGKRK
LVIPPQLGYG TAGAGGVIPP NATLIFDVEL LDVEK
|
|---|
| |