| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3204 |
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| Symbol | |
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| ID | 8138556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 3715997 |
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| End bp | 3717352 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644870809 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_003022989 |
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| Protein GI | 253701800 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.154583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATGCA TCCCCTCAAA ACCGTGCCTA GCCTTCCTGC TTTTCTGCCT CGGCCTTCTT
ATCGAGGCGA CGAACGCGAC AGCCGGCGTC CCGACCACCG TGATCGTCAA CCGGGGAGTG
GTTCTCAACC TGAAGAACCC CGCCCGCTAC GTCAACATCA CCGACAAGGA CGTGATCGAC
GTCCCCGATC CCCTGCGCCG CAACCAGCTC CTCATCAACG GCAAGAAGAT CGGCTCCACC
AACCTGATTG TGTGGGAGGA GAACAATGAG AATCCGACCT TCTTCGACGT CCGGGTGGTG
GGGGACCGGG AGGCCATCGA GTCCCAGATC AGGGATTACG CCCCCAACGA CGACATCAGC
GTCCAGTATG CGCAGGACAC GGTGGTCCTC TCCGGCAAGG TCGCCAACGA GATGACCGGC
AAGAAGGCGG AGGAGATCGC CAAGGCCTAC TCAGCGAAGG TGCTGAACCA CATCACCGTC
GATGAGCCGC AGCAGGTGCT TTTGCAGGTC AAGGTGGCGC AGGTGGACCG GACCTCGCTG
AAGCGGCTCG GCATCAGCGC CATGGTGAAG GGAAGGACCG CCGAAGGGTT CATGAACCTG
GTAGGCGCCC CCAGCGGCAC CAGCAGCGTC ACCAACTCGA GCGCCACAAG GTTCACCTCG
ACCGAGGCTT CCGGCATCGC GGGTTCCATC CCGGGGCTTG GGAGCTTCGA CCCGCTGGAC
GCCTTCAACG TCGGGGTCTC CTACTTCCCC GCCGGCATCG GTGCCGTGCT CCAGGCCTTG
AGCAGCAAGG GGCTCGCCAA GATCCTCGCC GAGCCCAACC TGCTGGTGAA AAGCGGCGAA
GAGGGGAATT TCCTCGCCGG GAGCAGGATC CCCTACAGCG TGCTGATCTC GACCGGCGGG
GCGTCCACCT CGTCCATCAT CTTCGAGACC GTGGGGGTGA AGCTCAAGTT CAAGCCGCAG
GTGCTGCAAA ACGGCCTGAT CAACCTGAAG ATCGATCCCG CTGAGGTAAG CAGCATCGCC
GGGACCCTCG CGGTCAACGG CTACCCCATC ATCGACACCA GGGACGTCCG GACCGACGTG
GAACTGCGGG ACGGCGAGAG CCTGATTCTG GCCGGCCTGC TCCAGGAAGA GCAGATCAAG
ACCATGTCCA AGATCCCACT TTTGGGGGAC ATACCGATCC TCGGTGCGCT GTTTCGCTCC
TCGCAGAAGG ACATCCGGGA GAAGGATCTG GTCTTTTTCA TCACGCCGAA AATAGTTAAG
CCCACTCCCG CAGGGGTCGC GACCAAGCTC CCCACCGACG CCGTTACTCC CGCGGAGGAG
AAGGGATACG ACTGGATCCC GCTGGGACGA AAGTAG
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| Protein sequence | MRCIPSKPCL AFLLFCLGLL IEATNATAGV PTTVIVNRGV VLNLKNPARY VNITDKDVID
VPDPLRRNQL LINGKKIGST NLIVWEENNE NPTFFDVRVV GDREAIESQI RDYAPNDDIS
VQYAQDTVVL SGKVANEMTG KKAEEIAKAY SAKVLNHITV DEPQQVLLQV KVAQVDRTSL
KRLGISAMVK GRTAEGFMNL VGAPSGTSSV TNSSATRFTS TEASGIAGSI PGLGSFDPLD
AFNVGVSYFP AGIGAVLQAL SSKGLAKILA EPNLLVKSGE EGNFLAGSRI PYSVLISTGG
ASTSSIIFET VGVKLKFKPQ VLQNGLINLK IDPAEVSSIA GTLAVNGYPI IDTRDVRTDV
ELRDGESLIL AGLLQEEQIK TMSKIPLLGD IPILGALFRS SQKDIREKDL VFFITPKIVK
PTPAGVATKL PTDAVTPAEE KGYDWIPLGR K
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