Gene GM21_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3190 
Symbol 
ID8138542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3702884 
End bp3704050 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content54% 
IMG OID644870795 
ProductAAA ATPase 
Protein accessionYP_003022975 
Protein GI253701786 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTCA ACTTCTATAA CCTCGATAAA GAACCTTTCC AGATAACTCC GGATCCTGCG 
TTCCTGTACC TGAGCAGCGT GCATAAGGAG GCGCTTGCTT CCATCATCTA CGGAGTCGAA
AAAAGAAAGG GGTTCATACT GATTACGGGT GCGGTAGGAG TGGGGAAGAC AACCATCCTA
AGGGCTTATC TGGAAAAGGC CGAGGCCCAA CATCTCAAGA CCATCTACTT GTTTAACGCG
AACATCTCTT ACCGTAACCT GCTGAAGTAC ATTTTCGCAG AGCTCAACAT GGCGCCTCAA
TCCAACGACG TTTCCGATTT GGTGAACCAA TTGCACCAGA GGCTCCTCTA CGACTACCGT
GAAGGGCGCA ACATCCTGCT GATCATAGAC GAGGCACAGA ACATGCCCGT CGACACGCTG
GAAAACCTCC GCATGCTATC GAACTTCGAG ACGGATACGG AGAAGCTCAT CCAGATCGTG
TTCTGTGCGC AAACGGAATT CGAGAAGACG CTGAGTTTGG ACGAACTGAA GCAACTCAAG
CAACGCATCG CGGTGAAGGC TACTATCTCC CCTCTCACCA GGGAGGAAGG TATCACCTAC
ATCCATCATC GGTTGAAAAC GGCTGGCGAC AAGGATTGCA TCATTTTCAC CGACGGAGCT
TTGAACCAGA TCGTGCAGGC ATCGCGCGGA ATCCCCCGGG TCATCAACGT ACTCTGCGAC
AACAGTCTGA TCACCGCCTT CGGTTACGGC AAGAAGAGGG TGGGCAGCGG CATCGTGCGG
GAGATCACCC GGGATTTCGG GTTGGAGAAT ACTCTGTATG TCAGGTGTGG CGTGTTTTTG
CTGATGCTGC TGCTTATAGC CGCAGCTTTC TTCGGTGCGC GGCAAATGAC GTCCTTGATG
GCTGCGAAAG CTCCAGTTGG CGTGCAAGCG ACGACGGCGG TTCCGCAGAC CCGGCCGGCG
CCCATTCCTG AACGGGTTGC CGGGGACCAA CGGGCGCTCA GGAGGGTGGT ACAACGGGGA
GACACTTTGG CGAAGATGAT AAAAGAGGTT TACGGCGAGG TCGACGCTGA GAAAATCAGG
CGAGTTAAAG AAGCCAACCC GAGCATCGTG GATGAAAACG TAATCGTGGA AGGGGGAGTT
ATCTCATTCC CCTACCGTAA CCGCTGA
 
Protein sequence
MYLNFYNLDK EPFQITPDPA FLYLSSVHKE ALASIIYGVE KRKGFILITG AVGVGKTTIL 
RAYLEKAEAQ HLKTIYLFNA NISYRNLLKY IFAELNMAPQ SNDVSDLVNQ LHQRLLYDYR
EGRNILLIID EAQNMPVDTL ENLRMLSNFE TDTEKLIQIV FCAQTEFEKT LSLDELKQLK
QRIAVKATIS PLTREEGITY IHHRLKTAGD KDCIIFTDGA LNQIVQASRG IPRVINVLCD
NSLITAFGYG KKRVGSGIVR EITRDFGLEN TLYVRCGVFL LMLLLIAAAF FGARQMTSLM
AAKAPVGVQA TTAVPQTRPA PIPERVAGDQ RALRRVVQRG DTLAKMIKEV YGEVDAEKIR
RVKEANPSIV DENVIVEGGV ISFPYRNR