Gene GM21_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3180 
Symbol 
ID8138532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3688895 
End bp3690877 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content60% 
IMG OID644870785 
Productasparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_003022965 
Protein GI253701776 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones109 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGTGGTA TCGCCGGAAT AGTTGCTGGG GAGGGTAAAG CGGCACCGAA CCTGGAGCGG 
ATCGTTGCCA TGATCTCGCC GTTGCGTTAT CGCGGCCCTG ACGAATCCGG TGTGTACCTG
GACCGCCGCG CCGCGCTGGG ACACCTGCGC CTGAGCATCA TCGGCATAGA CGGTGGGATC
CAGCCCATCG GCAACGAAAC CGGCAAACTC TGGATCGTCT ACAACGGTGA AGCATACAAC
TACCTGGAAC TTCGGGAAGA GCTGGAGGCG AAAGGACATC GCTTCACCAC CCGTACCGAC
ACTGAGGTGC TGCTGCACCT CTACGAAGAG TACGGCGCCG ACTTCCTGTC CAGGGTCAAT
GGTCAGTTCG CCCTCGCCAT ATGGGACAGC GGGAAAGAGG AACTGTTCCT CGCCAGGGAC
CGGGTCGGCA TCAGGCCCCT TTACTACGGT TGGTCTCGCG AAGGGAGCTT CTTGTTCGCT
TCCGAGGTGA AAGCCATTTT GGCAGTAGAC GGTAGCCGGG AACTGGACCT CGAGGCTCTT
GGCCAGCTCT TCGTCTTCTG GACCACGCTG CCGGGAAGGA CTTTTTTTCG GGGGATTCAG
GAAGTTCCCC CCGGCCATTA CCTTATCGTC GGTAAAGGTG AGCCGGTGCC ACACTCCTAC
TGGCGCATCC CGTTCCATCC TCCCGAGGAG TGCTGCGCCT TTGGGCTTGG GGACACGGCT
GAAGCGCTAA GAGAGCTTCT AGGCGATGCG GTGCGCCTCA GGCTGCGCTC AGATGTCCCG
GTGGGGGCGT ACCTAAGTGG CGGCCTCGAT TCTTCCGTGA TCACTACGCT CATTCAGCGC
CATTGCGATA GCCATCTGAA GACCTTCTCG CTTGCCTTCC AGGACGGCGT CTTTGACGAG
AGCCCTGCGC AACGGGAGAT GGTGCGCTTC CTGGGGAGCG ACAACCGGCA GGTCTTGGTG
GAAAACGGCG ATATCCGCCG CTTTTTCCCG GAGACGATAT GGCACTGTGA AAAACCGACG
CTGCGCACTT CGCCGGTGCC TATGTTCCTG CTGTCCAGGC TGGTTCGGGA GGAGGGGTAC
AAGGTGGTGC TCTCCGGCGA GGGGGCGGAC GAGATCTTCG GGGGATACAA CATCTTCAAG
GAAGCGAAGA TCCGCCACTA CTGGGCGAAA TGCCCGGACT CTTTCCGGCG TCCGCTGCTT
TTGGAGAGGC TTTACCCTTA CATCTTCACG AACCCCGGGC GCGGCCGTAG CTTTCTGCAG
GGGTTTTTCG CGGTGTCGCC GGAGCAGATG CACGACCCGT TTTTTTCCCA TGCGGTGCGT
TGGCACGTCG GGGAGCGCAA CCTCGCGTTT TTGGCGCCGG ACTGTCTGGC CGCCCTGTCG
CAATACCGGC CCATGGAGGA ACTGGCCCGG TGGCTCCCGG ACAATTTCAT GCGCCGTGAC
CTTTTGTCCC GGGCCCAGGT GCTGGAGATG GAGATCTTTC TCTCCAGCTT CCTTCTCTCC
TCACAAGGAG ACCGGGTCGC CATGGCCCAT TCGGTCGAGA TGCGCCACCC CTTTCTGGAT
TACAGGGTGG TGGATTTCGC TTTCCGTCTC CCGGCTAAAT GGAAGCTGCG GGGCCTGAAT
GAGAAGTTCC TGCTTAGGCA CGCCTTCCGG GGGATGTTGC CCGAGGGAAT CGCCAGCAGG
GCAAAGCACC CGTACCGTGC CCCGATCAGC GAGCTCTTCC AGGGCGAGGT TCCTCTCGAT
TACGTGGACG AGTTGCTGTC GGAGCAGAGC CTGAAGCAAA GCGGTTATTT CAATGCCGAA
AAGATCCGCC GTCTCTATTT GAAGGTCAAG GGTGCGCAAC CCGGCGCCAT CGGCGAATTC
GAGAACATGG CGCTCATCGG CGCACTTTCA ACCCAGATAC TGCATCGGCA GTTCATCGCC
GAGTTTCCCT TGCGGCGGAG CGTCGTGCTG CAACCGGACT TGGTGCAGTA CGGGAGCCTC
TGA
 
Protein sequence
MCGIAGIVAG EGKAAPNLER IVAMISPLRY RGPDESGVYL DRRAALGHLR LSIIGIDGGI 
QPIGNETGKL WIVYNGEAYN YLELREELEA KGHRFTTRTD TEVLLHLYEE YGADFLSRVN
GQFALAIWDS GKEELFLARD RVGIRPLYYG WSREGSFLFA SEVKAILAVD GSRELDLEAL
GQLFVFWTTL PGRTFFRGIQ EVPPGHYLIV GKGEPVPHSY WRIPFHPPEE CCAFGLGDTA
EALRELLGDA VRLRLRSDVP VGAYLSGGLD SSVITTLIQR HCDSHLKTFS LAFQDGVFDE
SPAQREMVRF LGSDNRQVLV ENGDIRRFFP ETIWHCEKPT LRTSPVPMFL LSRLVREEGY
KVVLSGEGAD EIFGGYNIFK EAKIRHYWAK CPDSFRRPLL LERLYPYIFT NPGRGRSFLQ
GFFAVSPEQM HDPFFSHAVR WHVGERNLAF LAPDCLAALS QYRPMEELAR WLPDNFMRRD
LLSRAQVLEM EIFLSSFLLS SQGDRVAMAH SVEMRHPFLD YRVVDFAFRL PAKWKLRGLN
EKFLLRHAFR GMLPEGIASR AKHPYRAPIS ELFQGEVPLD YVDELLSEQS LKQSGYFNAE
KIRRLYLKVK GAQPGAIGEF ENMALIGALS TQILHRQFIA EFPLRRSVVL QPDLVQYGSL