Gene GM21_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3149 
Symbol 
ID8138501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3652784 
End bp3653923 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content62% 
IMG OID644870754 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_003022934 
Protein GI253701745 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones141 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG TAGCTCTCAT CACCGGCGTC ACCGGACAAG ACGGCGCATA CCTGGCGGAA 
TTCCTGCTCA AAAAGGGTTA CGTCGTGCAC GGCATCAAGC GCCGCGCCTC GCTCTTCAAT
ACGGACCGGA TCGACCACCT GTACCAGGAT CCGCACATCG AGAACCGCGA CTTCATCCTC
CACTACGGCG ACCTGACCGA CTCCACCAAC CTGATCAGGA TCATCCAGCA GGTGCAGCCC
GACGAGATCT ACAACCTGGC CGCCATGTCG CACGTCGCCG TCTCCTTCGA GACCCCGGAA
TACACGGCAA ACGCCGACGG GCTCGGGACG CTGCGGATAC TGGAAGCGAT CCGGATCCTC
GGGTTGGAGA AAAAGACGAA GTTCTACCAG GCCTCCACCA GCGAGCTCTA CGGGTTGGTG
CAGGAAGTGC CACAGTCGGA AAGAACCCCC TTCTACCCCC GCTCCCCCTA CGCGGTAGCG
AAGCTTTACG CCTACTGGAT CACGGTCAAC TACCGTGAAG CCTTCGGCAT GTACGCCTGC
AACGGCATCC TCTTCAACCA CGAGTCCCCG ATCCGGGGAG AGACCTTCGT CACGAGAAAG
ATCACCCGCG CCATAGCCCG CATCTCCCTC GGCCTGCAGA ACTGCCTCTA CCTCGGCAAC
CTGAGCGCCC TGCGCGACTG GGGGCACGCC CGCGATTACG TCGAGATGCA ATGGCTCATG
CTGCAGCAGG AGGAGCCCGA TGATTTCGTC ATCGCCACGG GGAAGCAGTT TTCCGTCCGG
CAGATGGTGG AAGAGGCGGC CAAGGGTGTC GGCATCGGCA TGCGCTGGGA AGGCGAAGGC
GTCAACGAGA TCGGCATCGT CGCGTCCATA GACAGCCACG GCACCAAGAC CGAAGGGGGC
GCCGCCGGCC ACCTGCAAGT GGGGCAGGCC ATCGTGAAAG TCGACCCCCG CTACTTCAGG
CCGACCGAGG TGGAGACCCT CTTGGGAGAC CCGAGCAAGG CACGGCAGAA ACTGGGGTGG
GTTCCGAAGA CCACGTTCGA GGAACTGGTG GCCGAAATGG TGCACTCCGA CCTGGAGGAA
GCGCGACGCG ACGAGCTCTG CAAGCATCAC GGCTTCAGCA CCTACAACTA CCACGAATAG
 
Protein sequence
MAKVALITGV TGQDGAYLAE FLLKKGYVVH GIKRRASLFN TDRIDHLYQD PHIENRDFIL 
HYGDLTDSTN LIRIIQQVQP DEIYNLAAMS HVAVSFETPE YTANADGLGT LRILEAIRIL
GLEKKTKFYQ ASTSELYGLV QEVPQSERTP FYPRSPYAVA KLYAYWITVN YREAFGMYAC
NGILFNHESP IRGETFVTRK ITRAIARISL GLQNCLYLGN LSALRDWGHA RDYVEMQWLM
LQQEEPDDFV IATGKQFSVR QMVEEAAKGV GIGMRWEGEG VNEIGIVASI DSHGTKTEGG
AAGHLQVGQA IVKVDPRYFR PTEVETLLGD PSKARQKLGW VPKTTFEELV AEMVHSDLEE
ARRDELCKHH GFSTYNYHE