Gene GM21_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3122 
Symbol 
ID8138472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3624377 
End bp3625084 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID644870726 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003022908 
Protein GI253701719 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones146 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA GCCAAGAGCC GACCGGGCAG CGCATACTCG TCATCGACGA CGAGGCGGCG 
ATCCGCCGCT TCCTGCATTC CGCGTTGTCC TCGGAGGAGT TCACCCTCCA CGAGGCCGAT
TCCGGTCACG GCGGACTGTC CGCCGCCGCG GCCCTGAGGC CCGACCTGAT CCTCCTGGAT
CTGGGGCTTC CAGACCTGGA GGGGATCGAG GTGATCCGCC GCATCCGCGA GTGGTCCCAG
GTCCCCATCA TCGTCCTCTC CGTGCGCGAG CGCGAGGACG ACAAGGTGGC GGCTCTCGAC
GCCGGGGCCG ACGACTACCT CACCAAGCCG TTCGGGGTGG GGGAACTGCT GGCCCGCATG
AGGGCCTCCC TGCGCCGTTC CGCGGTGCAG CTCTCCGAGC CGGTCTTCTC AAGCGGCGAC
CTCACGGTGG ATTTGAACCT GCGCCGGGTG ACGGTGGAGG GGGGCGAGGT CCAGCTGACG
CCCACCGAGT ACGACCTTTT GCGCCTGCTC ATCACCCACG CGGACAAGGT CATTACCCAC
AGCCAGATCC TGAAGCAGAT CTGGGGGGTG GCCTACCAGG AGCAGCCCCA GGTGCTCAGG
GTCACCATCA GCAACCTGAG GAAGAAGATC GAGCGCGACC CCTCGCGCCC CAGGCACATC
ACCACCGAGC CGGGAGTAGG CTACCGGTTG AAGCAGGCGC AACCATGA
 
Protein sequence
MKESQEPTGQ RILVIDDEAA IRRFLHSALS SEEFTLHEAD SGHGGLSAAA ALRPDLILLD 
LGLPDLEGIE VIRRIREWSQ VPIIVLSVRE REDDKVAALD AGADDYLTKP FGVGELLARM
RASLRRSAVQ LSEPVFSSGD LTVDLNLRRV TVEGGEVQLT PTEYDLLRLL ITHADKVITH
SQILKQIWGV AYQEQPQVLR VTISNLRKKI ERDPSRPRHI TTEPGVGYRL KQAQP