Gene GM21_3102 details

Gene Information

• Locus tag: GM21_3102
• ID: 8138452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3592706
• End bp: 3596104
• Gene Length: 3399 bp
• Protein Length: 1132 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644870706
• Product: PKD domain containing protein
• Protein accession: YP_003022888
• Protein GI: 253701699

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 138
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGGACA GCACCGGTAA CTACATCAAC TACGGCCCCT TCCAGTTGGG CGCGGACGGC 
ATGCCCACCG CGGAAACCAT GGGGAGCCTC ACCACCATGC TGATGGGTAG CGCAAGCTTC 
AGCACCGTAG CCGGCAGCAA TCCGCTGCTC ACCAAGGTCG ACTATTCCGC CTGGGACCTC 
TCCCAGGCTT GCGGCTCCTG CCACGTCGGC GGCGGCTTCG TCGAGAAGGA CCGCGAAGGG 
AAGCGCTTCA GCATGATGAG CCCCTTCGTC GACGGCATCA CCCCGTACAC CATGACCATC 
TTCGAGCGCT ACGACGCGAC GACCGGGCTG CCGGCTCACA CCGTCGAGCC CGCTCCCTGG 
TCCTATCCGA TCTGGAACGG CTCCACCCCC GTGACCGCCG ACGCCGGCTG GGGACAGCCG 
ATGACCATGA CGCTTCCGGA CGGCTCCGCC ATGCCGGTCG TGGACAAGCA GGTCATGATG 
CCCAACGTGA AGGAGATGGA CTGCCTCATG TGCCATTTCC AGGGGTACAA CAACCTCATG 
TCCTCGGTCA TGGCCTACTC CGGCGCGCAT AACGCGACGC CTAGCTTCGG CGCGGGCTTC 
ATGAACATGT TCACCCAGGC CTACGACTTC GCCACCGGCC TTTTGCAAAA AGACGGCAAC 
GGCGTGGTCT CGCTCTCAAG CCTCGGCCTC TCCAAGATGA AGTACGATCC CCCCAGCCAG 
AACTGCCGCA ACTGCCACAT GCCTTCGAAC CTGAAGGACC TGCCGGACAT GATGAGCGAC 
TTCCTCTCCT CCGCTCCCAT GATCTACAAC GGCAATTTCG ACGGCAACAA GCGGGGTTCC 
TTCACCGGCC TTACCATGCC GGCCTTCGAC TTCAACGCCC CGATAAGCTT CGACCGCGGC 
GCCACCGCCT ATACCTGGGA CTGGACCGCG GCCTATGCGA CCTCGCCGAC CCTGTACATG 
ACCATGACCG GCATCGGGAG CACGACCCCC GGCTTCACCG GCACGACTAT CCCCGCCGGG 
TGGCCCGCCG CCATGGGGAT GAGCGAGTTC AACAAGCCCG CCTTCGACGC CTTCTCCACC 
GCCATGCCGG GGATGAAGCA GTATTTCCTG GGCGGCGGCA ACCGTCCCGG CACCGGCCCG 
ATCTACTACC AGGCCACCCT GGCCGACGGC ATGCACCAGG ACCAGAACGT GCTCAAAAAG 
AGCACCGTTC CCTTCCCGCG CGCCGAGTGG TTCAAGCGCG GCGATCTCTG GGAGCCCGGC 
TACGACGTCC ACATGACGCT CGAGTGCGCC GGCTGCCACA TGAACACCGC GACCACGAAG 
ACCGACAAGT ACGACGCTAG CGGCAACCTG ATCTTCGACG GCAAGAGCGA TTGCGATCCG 
GGCCGCGGCT ACGACAGCGC CGGCGGCGTG GAAGCGAACC CCGCCTTCAA GACCACCGTC 
AACAGCCAGA ACACCGTCAA GAGCTGCGAG GCCTGCCACG TGACCGGCAA GAACCACGAC 
GGCGTGGTGG TCGACACCTA CGGCGCGCCC GACCCGGCTT CCGCTCACAA GGCCGCGGGC 
CTTCTGGCCA ACGTCACCAA TGCGGTGCGC CTGAACGCCG CCACCGGCGC CGAAGAAAAC 
TTCACCGGCA GCCACCTGGA TGTCGTCGAC TGCACCGTCT GCCACCTGAG CCGCGAGCAG 
ATGGTGGTCC GTCTCCTCGA CTGCACCTCC GGCAACCGCT ACCCCAACAT GCTCGGCTTC 
GACGAGAACC GCGGCATGAT GGGTATGTTC AGCGACCCGA TGGGCCAGCA GTGGCCGGTC 
GGCAACAACC TGAAGAAGTG GGATCCGCTC TACACCTGGC AGAAGGGGGG CAGCGACGCC 
AAGGGGAGCG CAGGCTCCTG GAACGCCGAA TGGCGCCGCA AGATCTACGC CGTCAACCTG 
ATCACCGCAG CCATCTGGAA CAACGTCGAC GCCAACGTCG ACGCCAACGG CGACGGCGTC 
CCGGGGCGTG CCCCGAGCAT CCACCCGGGC ACTCCGGAGG TCTCCCCCAG CACCAACTAC 
GACCCCTGGA TCTCCCGCGA CATGAAGGCC GGCATTAACT ACGGTCCTTC CGGCTTCGCC 
CCCATCCCGG TCGGCTTCGG CGACAACGAC GCCTTGAAGG GACCGTTCGC GGTCAACTTC 
CAAAGCGCCT ACAACGCCGA CGGCAGCTTC ACCGGCGCCC TTAAGTACGT CGGCGTCTAC 
GGCGGCAACG CCATGTTCTC CACCCCGCAG GAGATCTCGG GCTACAAGTC CTGGCGCAAC 
TCCATCAAGG CGGGCGTGGA CAACAAGGAC TGGACCGGAA CCCAACTCGC CTTGGTGGCC 
GGCCCCTACA AGCTGACCCA CGGCATCAGG GCGACCGAGA AGTTCGTCCT CGGCAAGAAG 
ACCGAGACCG GCTTCGGCTG CGCCGACTGC CATGCGCCGG CGGCAACCGC CAAGGTGGCG 
TTCTTCGACG GCACCATCAA CATGGTCGGC ACCGCGGTCA ACACCCATAA AGCGATCCAG 
GCAGGCAAGG GCTTCATGGA GGCCTCGGCC GAACTGATGG AGATCGTGGG TGCGAAGGAA 
GACATCGACA CCGCGACGGA AGTGGCAACC AAGGCCGGCG GAGCGGTGGA AGTGAAGTTC 
GAGGAACTCG GTGACTGGGA CGGGGCGGCG TTCAGCGTGA ACCCCGCCGG CGAGTACAAG 
CGCGTCACCG AGATGGACCG AAACGAAGCG CTCTACCCGG CGGTGTCCGG CGTGAGCTTC 
ACCGACATCA ACGGCAACAG CTACGCCGAC CGCGACGCCT GGAGGGGGTA CTTGACCGGC 
ATCACCCCGG CGCAGGCCGG TATCGGCGTG GCGCCGGTGG CAAGCATCGT CTCGACCGTC 
ACCGACCTCG ACCCCGCTGC CGCAGGCACC CAGGTCGCCG CCAACGCTGC GGTAACCCTG 
ACCGCAGGCG TCGCGCAAAC AGGCGGCGTG GTCAGCTACA GCTGGAGCTC AAGCGACGGC 
ACCGTGATCC CGGCGGGCAA GGAGAGCAGC GTCACCTTCA CCACCACCGG GAGCAAGACC 
GTCACCCTCA GCGTGACCGA CGAGGAAGGA AACAAGGCGT TCGCGACGCT GAACCTCCAG 
GTCGTGGCGG TTCCGGCGGA GATGATCTCC TGGAACGACG CAGCCGGCAG CCTGGGCGGC 
GTCATGACCG TGGCCGGCAT GCCCACCCCC AACGACAAGG TGAAAATCGT CTGGGGCGAC 
GGCAAGTACC AGTATGTCAC CCTCGCCAAC GCGGCGAGCA TCTCCAGGGC TCACGTCTAC 
CTCACCGCCG GCAACAAGCT GGTGCAGGTG TACATCTACA AGGCGGGGGT GCTGGTAGGG 
ACCTCCAAGA AGAGCATCAC CGTAAACGGC GGCAACTAA 

 

Protein sequence

MKDSTGNYIN YGPFQLGADG MPTAETMGSL TTMLMGSASF STVAGSNPLL TKVDYSAWDL 
SQACGSCHVG GGFVEKDREG KRFSMMSPFV DGITPYTMTI FERYDATTGL PAHTVEPAPW 
SYPIWNGSTP VTADAGWGQP MTMTLPDGSA MPVVDKQVMM PNVKEMDCLM CHFQGYNNLM 
SSVMAYSGAH NATPSFGAGF MNMFTQAYDF ATGLLQKDGN GVVSLSSLGL SKMKYDPPSQ 
NCRNCHMPSN LKDLPDMMSD FLSSAPMIYN GNFDGNKRGS FTGLTMPAFD FNAPISFDRG 
ATAYTWDWTA AYATSPTLYM TMTGIGSTTP GFTGTTIPAG WPAAMGMSEF NKPAFDAFST 
AMPGMKQYFL GGGNRPGTGP IYYQATLADG MHQDQNVLKK STVPFPRAEW FKRGDLWEPG 
YDVHMTLECA GCHMNTATTK TDKYDASGNL IFDGKSDCDP GRGYDSAGGV EANPAFKTTV 
NSQNTVKSCE ACHVTGKNHD GVVVDTYGAP DPASAHKAAG LLANVTNAVR LNAATGAEEN 
FTGSHLDVVD CTVCHLSREQ MVVRLLDCTS GNRYPNMLGF DENRGMMGMF SDPMGQQWPV 
GNNLKKWDPL YTWQKGGSDA KGSAGSWNAE WRRKIYAVNL ITAAIWNNVD ANVDANGDGV 
PGRAPSIHPG TPEVSPSTNY DPWISRDMKA GINYGPSGFA PIPVGFGDND ALKGPFAVNF 
QSAYNADGSF TGALKYVGVY GGNAMFSTPQ EISGYKSWRN SIKAGVDNKD WTGTQLALVA 
GPYKLTHGIR ATEKFVLGKK TETGFGCADC HAPAATAKVA FFDGTINMVG TAVNTHKAIQ 
AGKGFMEASA ELMEIVGAKE DIDTATEVAT KAGGAVEVKF EELGDWDGAA FSVNPAGEYK 
RVTEMDRNEA LYPAVSGVSF TDINGNSYAD RDAWRGYLTG ITPAQAGIGV APVASIVSTV 
TDLDPAAAGT QVAANAAVTL TAGVAQTGGV VSYSWSSSDG TVIPAGKESS VTFTTTGSKT 
VTLSVTDEEG NKAFATLNLQ VVAVPAEMIS WNDAAGSLGG VMTVAGMPTP NDKVKIVWGD 
GKYQYVTLAN AASISRAHVY LTAGNKLVQV YIYKAGVLVG TSKKSITVNG GN