Gene GM21_3097 details

Gene Information

• Locus tag: GM21_3097
• ID: 8138447
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3587879
• End bp: 3588370
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644870701
• Product: Sel1 domain protein repeat-containing protein
• Protein accession: YP_003022883
• Protein GI: 253701694
• COG category: [R] General function prediction only
• COG ID: [COG0790] FOG: TPR repeat, SEL1 subfamily

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 127
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCAAAT GGAGTTTTGC TGTAGGATGC GCTTTGCTTT TGTCACTGCT GGCGCAGTCG 
CCCTGCTTCG GCTTTGACGG CGTGGAGGTA CCCCAGGTGC GGCGCCTGGC CGAGGAGGGG 
AACGCCGAGG CGCAGTCCAA GCTGGGGGTG CTGTACGCCT CCGGGATCGG GATGCCGCAG 
GACAAGAAGG AGGCGGCGAA ATGGTACGGC AGGTCGGCCG AGCAGGGGTA CCCGCTGGGG 
CAGTGGAACC TGGCCTTCAT GTACCTGCGC GGGGACGGGG GGCTCAAAGA GGATCCTGAA 
AAGGCGCGCG ATCTTTTCCG GAAGGCGGCG GAGAAGGGGC TGGCCGCGGC GCAGTACGAT 
CTCGGGATGA TGTACCTCTA CGGGGTGGCG GTGCCGCAAA GCCGCGACGA AGCCGAAAAA 
TGGCTGCGCC GCTCCGCCGG ACAGGGGTAC CGCGAGGCTA AAAAGAAGCT GGAAGAGGTG 
TCGGCGAGGT AG 

 

Protein sequence

MGKWSFAVGC ALLLSLLAQS PCFGFDGVEV PQVRRLAEEG NAEAQSKLGV LYASGIGMPQ 
DKKEAAKWYG RSAEQGYPLG QWNLAFMYLR GDGGLKEDPE KARDLFRKAA EKGLAAAQYD 
LGMMYLYGVA VPQSRDEAEK WLRRSAGQGY REAKKKLEEV SAR