Gene GM21_3078 details

Gene Information

• Locus tag: GM21_3078
• ID: 8138428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3570829
• End bp: 3571587
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 644870682
• Product: Type II site-specific deoxyribonuclease
• Protein accession: YP_003022864
• Protein GI: 253701675

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 0.00000000559294
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTCTCTTG AAATTGAATC TATCAGGCCT AAAGTGGAAG CCGCTGTCAG GTCGTTCTGG 
GCAGTACGGG CCGGTGGAAA TGGCGTACTC GGAGGAAAGA CACTCGATGC CTTTGCAGAA 
ATTATCAAAG ATGTAGTGAA AGGTTCGCTC GAAAACGCAA TGATGTGCGG TCGCGGTTGT 
GTAGCCGAAA TACCCGGCTT TTATCGCCCA CACAAGTCAT GGGACTTAAT AGTAATAGAC 
GAAGGGAAGC TTGTTGCCGC CATTGAGTTT AAGTCTCAAA TCGGCCCGAT CGGCAATAAT 
TTCAATAACA GAACTGAAGA AGTTTTAGGG AGTAGCTTGG ACCTCCAAAC AGCAATTGAG 
GAAAATGCAT TTGGTCTTGA AGCCAATGTA TTCAGCGGCT ACATCATAGT GGTAGAGGAT 
TCCCCTAAAT CACGAGCCAA TCCTAAAATT AAAATGAAGT ATTTTCCTGT AATGGAAGGG 
TTCTTGGCGA ATGAGGACGA GCGCGGTCGA GCTTACTTCC CCAACCCTGA CGGTAGTTAC 
CCGCAAGCGA AGGGGATAAG TTACATCGAG CGATACGACC TGATGTGCAA ACGGCTGATG 
ATGAAGAAGC TGTACACGGC GTCAGCTGTC ATAACGTCTG AGCCCGGTGC CGGCTTGTCA 
GGGAGCTACG GCCATGTCAG CAAGGAAACC AGCATCGAGG CTTTCCTGAT CAAGCTGGCG 
AAGCATTGTG AGGGAATTGC TGAGATGAAG AGCCTTTGA 

 

Protein sequence

MSLEIESIRP KVEAAVRSFW AVRAGGNGVL GGKTLDAFAE IIKDVVKGSL ENAMMCGRGC 
VAEIPGFYRP HKSWDLIVID EGKLVAAIEF KSQIGPIGNN FNNRTEEVLG SSLDLQTAIE 
ENAFGLEANV FSGYIIVVED SPKSRANPKI KMKYFPVMEG FLANEDERGR AYFPNPDGSY 
PQAKGISYIE RYDLMCKRLM MKKLYTASAV ITSEPGAGLS GSYGHVSKET SIEAFLIKLA 
KHCEGIAEMK SL