Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3060 |
Symbol | |
ID | 8138406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3548990 |
End bp | 3550282 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644870660 |
Product | protein of unknown function DUF107 |
Protein accession | YP_003022846 |
Protein GI | 253701657 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACTGT TTCTTCCGGC GTTGCTGGTG CTGGGGCTTT TGCTGCCGAT GCTGCTTTTC GGGGAGCAAC CGCAGGTGGC GGTCATTTCG GTGCGCGGCC CGATCAACCC GGTCACCTCA GGCTATCTGA AGCAGAGCCT GGAGGCGGCG GGAAAGCGCG GGGACCGGCT CCTCTTGGTC GAGCTGGACA CGCCGGGGGG GCTCGACACG GCGATGCGCG ACGCGGTGCA GGCCATCTTC GCCAGCCCGG TACCGGTCGC GGTCTACGTC ACCCCTTCCG GGGCCCGGGC CGCTTCGGCA GGGGCGGTGA TCGGACTTTC GGCGGACATC CTGGCCATGG CCCCGGGGAC CAACATCGGC GCCGCCCATC CGGTGGGGCT TGGCGGCGAA AAGCAGGACA AGGTGATGGC GTCGAAGATC GTCAACGACG CGGAGGCGTA TGTCGACGGC ATCGCCAAAA AGCGCGGCCG CAACGTGGAA CTAGCCAGGC GGATGGTGCG CGACAGCATC TCGCTTACCT CGGAGGCGGC GCTTAAGCAG GGGGTGATCG ATCTGGTCGC CGCCGACCGG CAGGAGCTTC TGGCCAAGCT GGAAGGACGC AAGGTACTCC GGGGGGGAAA GGAAGAGGTG CTGCACCTCT CGGGAGCGCG GGTGACCAGC TACGAGATGG GAACCCGCGA CAAGATCCTC GACGCCATCA GCAACCCGGA CGTCGCCTAC ATGCTGATGC TCCTTGGCAT GCTGGGGCTC TTTTTCGAGC TCTCCAACCC GGGGGTGATC CTGCCGGGGG TGATCGGCGG AATCTCCTTG CTCCTCTCGT TCTTCGCCTT GCAGACCCTG CCGGTGAACT ACGCGGGGAT CGCCCTGATA CTGCTCGCCA TCGTCCTCTT CATCGCCGAG GTCAAGGTGG TTTCCTACGG GATGCTCGCG GTCGGGGGGA TCGTCTCCAT GGTGCTCGGC TCGCTCATGC TCTTTCCGTC ACCGGAGCCG TACCTGCGCC TTTCCTGGAG CGTGATCATC TTGACGGTGC TCGCAACCGC GGGGTTCTTC ACCGTGGTGG TCGCCAAGGT GATGCAGGCG CACCGGGAAA AGCCGATCAC CGGCGTGGAG GGGATGCTCG GGGAGGAGGG GGTGGCGGAC AGCGACATCG ACCCGGAGGG AAGGGTGCTG GTGCGCGGCG AGTACTGGAA CGCGGTGAGC GGCGAAACCA TCCGGGCGGG GGAGAGGGTG CGGGTGGTGG AGGTAAAGGG GCTGCACCTC AGAGTCGAAA CCATTGGCAA GGAGAAAGTC TGA
|
Protein sequence | MRLFLPALLV LGLLLPMLLF GEQPQVAVIS VRGPINPVTS GYLKQSLEAA GKRGDRLLLV ELDTPGGLDT AMRDAVQAIF ASPVPVAVYV TPSGARAASA GAVIGLSADI LAMAPGTNIG AAHPVGLGGE KQDKVMASKI VNDAEAYVDG IAKKRGRNVE LARRMVRDSI SLTSEAALKQ GVIDLVAADR QELLAKLEGR KVLRGGKEEV LHLSGARVTS YEMGTRDKIL DAISNPDVAY MLMLLGMLGL FFELSNPGVI LPGVIGGISL LLSFFALQTL PVNYAGIALI LLAIVLFIAE VKVVSYGMLA VGGIVSMVLG SLMLFPSPEP YLRLSWSVII LTVLATAGFF TVVVAKVMQA HREKPITGVE GMLGEEGVAD SDIDPEGRVL VRGEYWNAVS GETIRAGERV RVVEVKGLHL RVETIGKEKV
|
| |