Gene GM21_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3053 
Symbol 
ID8138399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp3541315 
End bp3542013 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID644870653 
Productaspartate racemase 
Protein accessionYP_003022839 
Protein GI253701650 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones123 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TCGGCATGAT AGGCGGCCTG GGCCCGGAAG CCACGCTTGA TTACTACAAG 
CGCATCATCG AGGCCTCAAG GGGAGCCGGA ACCCTCGACA CCCCGGAGAT CATCATCTAC 
AGCGTCAGTC TGCAGGAGGT GCTGGACCTC GCCGCCCGGC GCGAGTGGAG CAACCTCATC 
TACCTCCTGA CGGCGAAGGT CAAGGCTCTG CAGAAAGCGG GGGCCGAGTT TGCCTTCATC 
TCGGCCAACA CCCCGCACGT CGTCTTCGAC GAGGTTCAGG CGAAGTCTCC CCTCCCGCTG 
GTGAGCATCG TCACCGCGAC CCTGGAAAAG GCGAAGGGGC TGGGGGTGAC GCGGGTAGGG 
CTCTTGGGAA CGAAGTTCAC CATGGAGGAG AACTTCTTCG CGCCGCCGTT TTCCGCAGCC 
GGCATCTCAG TCGTGGTGCC GCCCCTCGCC GACCGGCAGT ACATCCAGGA GAAGCTCATG 
ACCGAGATCG AGCTGGGGGT CTTCAAGGAC GAGACCCGAG ACGGCCTCCT GGCGGTGATC 
GGGCGCATGA AGGAGCAGGA GCATATCGAC GCGGTCATCC TCGGCTGCAC GGAGTTGCCG 
CTGATACTGC TAAAGGACGA GTTCGGGATA CCTTTCCTGA ACACGACGGC CATCCACGTG 
GAATGCGTGG TTGAGTACGC CAAAAAGGAG CGAAGATGA
 
Protein sequence
MKTIGMIGGL GPEATLDYYK RIIEASRGAG TLDTPEIIIY SVSLQEVLDL AARREWSNLI 
YLLTAKVKAL QKAGAEFAFI SANTPHVVFD EVQAKSPLPL VSIVTATLEK AKGLGVTRVG 
LLGTKFTMEE NFFAPPFSAA GISVVVPPLA DRQYIQEKLM TEIELGVFKD ETRDGLLAVI 
GRMKEQEHID AVILGCTELP LILLKDEFGI PFLNTTAIHV ECVVEYAKKE RR