Gene GM21_3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3026 
Symbol 
ID8138372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3514542 
End bp3515429 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID644870627 
ProductPolyprenyl synthetase 
Protein accessionYP_003022813 
Protein GI253701624 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones142 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA AGCAATATTT GAAGCAGAAG TGCGAGTTGG TCGACCAGTC GCTGGAGCGT 
TTCCTCCCCC ACGGGAAGGA ACTCCCGGCA TCCCTGCACG GTTCCATGCG CTACTCGGTA
TTCGCCGGAG GTAAAAGGGT GCGCCCGGTG CTCTTGCTTG CCGCCTGCGA GGCGGTTGGG
GGGGCGCTGA AACCTGCCCT GCCGGCTGCC TGCGCCATGG AGATGATCCA CACCTACTCC
CTCATCCACG ACGACCTCCC CGCCATGGAC AACGACGACT TCCGCCGGGG AAACCCCACC
AACCACAAGG TGTACGGCGA GGCGACCGCC ATACTCGCCG GCGACGCGCT CTTAACCGAG
GCCTTCATAC TCCTCTCCGG AAACGGCGAG GGGGTGGATC CCGCTGCGCG CCTTCGGGTG
ATCCACGAGA TAGCGCACGC TTCAGGCTCG CGCGGGATGG TCGGCGGGCA GATGGTCGAC
ATGGAGAGCG AGGGGAAGCA TGACATCGAC ATGGCTACGC TCTCCTACAT CCATACCCAT
AAGACCGGCG CCCTGATCCG GGCCTCGGTG CGCGCCGGCG CCATCCTCGG CGGAGCTGAC
GAGGAGGCCT TCGACGCACT CACCCGTTAC GCCGACGCCA TCGGCCTCGC CTTCCAGATC
GCGGACGACG TTCTCGACGT GGAGGGGACC ACCGAGGAAC TGGGGAAGGA CGCCGGGAGC
GATCAGGCCC GCGGCAAGGC GACCTACCCG GCGCTGGTCG GGCTGGAGGC GTCCAAGCGG
CGCGCCGAAG AGTTGGTGCA GATCGCTCTG ACCGCCCTGG AGCCGTTCGA CGAGCGGGCC
GAGCCGTTGC GAGCCATAGC TTCGTACATA GTGAAAAGGA AATCGTAG
 
Protein sequence
MDLKQYLKQK CELVDQSLER FLPHGKELPA SLHGSMRYSV FAGGKRVRPV LLLAACEAVG 
GALKPALPAA CAMEMIHTYS LIHDDLPAMD NDDFRRGNPT NHKVYGEATA ILAGDALLTE
AFILLSGNGE GVDPAARLRV IHEIAHASGS RGMVGGQMVD MESEGKHDID MATLSYIHTH
KTGALIRASV RAGAILGGAD EEAFDALTRY ADAIGLAFQI ADDVLDVEGT TEELGKDAGS
DQARGKATYP ALVGLEASKR RAEELVQIAL TALEPFDERA EPLRAIASYI VKRKS