| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3005 |
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| Symbol | |
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| ID | 8138348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3491964 |
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| End bp | 3493169 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644870603 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003022792 |
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| Protein GI | 253701603 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.00232151 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCTCT TTACCTGTAA AATAGGCGCC TCCGACGGCA AGGTCCTGGT CAAGGACCTC
GACGCGGTCA ACGCCGGCTT GCTTCGGCAG AGCCTGGAAG AGCAGGGTTA CGTCGTCTTC
GGGGTGCGCA AGAAGCCGTT TCAGTTCCTG CTGGAATCGG GTATCGGGCG CAAGAAGATC
GGCAACAAGG AGCTCTTGTT ATTCAACCAG GAACTCCTGG TGCTTCTCAA GGCCGGTCTC
CCCATCCTGC AGGCGCTCGA CACCATCCTG GAGTCGGGAG GGGGCAAGCT CAACGAGATA
CTTTCGGCGA TCCGCGAGGA CGTGAAAGGG GGACTGGCGC TCTCCGCCGC CTTCGAGAAG
TTTCCGAGGG TGTTTCCCCA TCTCTACATC GCGTCGGTCC GGGCCGGCGA GAGGACCGGG
GACCTGCCCC AGACCATCCG CCGTTACATC GCCTTCCTCA AGAGAACCGA GGGTTTCCGC
GGCAAGATCA TCGGCGCGCT CATCTATCCC GTCATCCTGA TCGCGGTCGC GGCGGTGGCG
ATCTCTCTTT TGCTCATCTA CGTGGTGCCG ACCTTCAGCA CCATCTACGC GGATTCCGGC
GCCGCTTTGC CGATTCCGAC CCAGATACTG ATCAACTTCA CCGGGCTCTT GCGGCGCTAT
CTGCCGCTGC TTCTGCTGCT GGCGGCCGTG GCGACGACGC TCTTCAAGCG CTGGAGCCAG
ACCGAGTCCG GGCGCTATGC CGTTGACGGC TTCAAGATCA AGACCCCGCT TCTGGGCGCC
ATCACCAGCC GATACGCCCT GGCCGGCTTT ACCCGCACCC TGGCCACGGT GCTCGGCTCC
GGCATCCCGA TCGTCGAGGC GCTGCGGATG TCGGTGGGGA CGCTCAACAA CAAGGTGCTG
GAGCGCGGTC TGCTCCTGGC GGTACACCGC GTCGAGGAGG GGAGCAAGCT TTCCACCGCG
CTGGAAGGGA TGAAGCTGAT GCCCCCCCTG GCGCTGCGCA TGCTCACCGT AGGCGAGACC
ACCGGCTCCC TGGAGGAGAT GCTTTCCGAC ATCTCCGATT ACTTCGAAGA GGAGATCGAA
AGGGATCTCC ATGTACTGAC CACCTCCATC GAGCCGGCGA TCATGGTGGT CATGGGTGTG
GTCATCGGGG TCATCATCGT CACCATGTAC CTGCCGATCT TCAAGATCGC CAGCACCGTC
AGCTAG
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| Protein sequence | MPLFTCKIGA SDGKVLVKDL DAVNAGLLRQ SLEEQGYVVF GVRKKPFQFL LESGIGRKKI
GNKELLLFNQ ELLVLLKAGL PILQALDTIL ESGGGKLNEI LSAIREDVKG GLALSAAFEK
FPRVFPHLYI ASVRAGERTG DLPQTIRRYI AFLKRTEGFR GKIIGALIYP VILIAVAAVA
ISLLLIYVVP TFSTIYADSG AALPIPTQIL INFTGLLRRY LPLLLLLAAV ATTLFKRWSQ
TESGRYAVDG FKIKTPLLGA ITSRYALAGF TRTLATVLGS GIPIVEALRM SVGTLNNKVL
ERGLLLAVHR VEEGSKLSTA LEGMKLMPPL ALRMLTVGET TGSLEEMLSD ISDYFEEEIE
RDLHVLTTSI EPAIMVVMGV VIGVIIVTMY LPIFKIASTV S
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