Gene GM21_3002 details

Gene Information

• Locus tag: GM21_3002
• ID: 8138345
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3488775
• End bp: 3489311
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644870600
• Product: Fimbrial assembly family protein
• Protein accession: YP_003022789
• Protein GI: 253701600

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 0.0000000637967
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAACTGA CCATAAACCT CGCTACCCGG CGCTACCTCA ACCTGCCCCG GCTGAACGCG 
GCTTTGATCG GCACCGGGGT CGTGCTGGCG GCGCTCCTCG TGTACCAGGT GCGCGAGATC 
GCCAACAACC AGATCGAGTT CAACAAGATC AAACGGGAGA GCGCCGCTGC GAACAGCGCG 
CATCCGGGCG CGGCGCCGGT GAGTCCGGAG CAGATGAAAT CCCTGGAGAG CCGCATCGCC 
TTCGCCAACG AGCTCATCGA CAAAAAGACC CTCAACTGGC TCGCTCTTTT GGACAAGCTC 
GAAGGGGTGG TCCCCGCCGG GGTCGCGCTG ACCCAGGTGG CACCGCCCTT GAAGGAACAG 
GCCCTGAAGC TTACGGGGGT TGCCTACAGC TTCTCCAACC TGCGCACGCT GCTGGAGAAC 
ATGGAACAGT CTCCCAATTT TTCGGAGGTG TACCTCCTGG CGCAAAACGA GGTCAAGGTG 
GGCAAGAGCC AGCAAGGAAT AGGATTCTCC ATCACCTGCA AGGTCGATTA TCGATGA 

 

Protein sequence

MKLTINLATR RYLNLPRLNA ALIGTGVVLA ALLVYQVREI ANNQIEFNKI KRESAAANSA 
HPGAAPVSPE QMKSLESRIA FANELIDKKT LNWLALLDKL EGVVPAGVAL TQVAPPLKEQ 
ALKLTGVAYS FSNLRTLLEN MEQSPNFSEV YLLAQNEVKV GKSQQGIGFS ITCKVDYR