| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2999 |
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| Symbol | |
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| ID | 8138342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3484966 |
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| End bp | 3487578 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644870597 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_003022786 |
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| Protein GI | 253701597 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0000000000114171 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATAGAC CAAGACCGAT CTTAACCCTG ATGCTGGTGG CACTGGCTCT TTCGGGCTGC
ACGTCCGGCC GCACCGCGTT CAGCAAGGCG GAGAAGCTGG AGCGAGAGGG GAACCTGGAC
GCCGCGCTGG TGAAATATGC CGAGGTGTCC GCTGCCAACC CCGATATCGG CGAGTACCGG
GTGAAGCTTT TGAACATCAC CGAGACGGCG GCTCGCGTGC ATTTCAAGAA GGGTGAGGAG
TTCTTCGCCA AGAATAACTA CGACGAAGCG CTCAGGGAGT TTCAAAGCGC CTACGCCATG
GACCCCACCA ACGTCCTGGC CAAGAACCAG GCCGACCATG TGCTGAAGCT GAGGAACGCC
CAGACCTACC TGCTGGAGGG GCTCGACTTC GAGAAAAACC GCAAACCGCG CGAGGCGATG
ATCGCCTTCA AGCACGCCCT CGAATTCCAC CCGAGCAACA AGGAGGCGAA GGAAGGGCTG
GATCGCATCA TCGCCAACAA GCGCCAGAAG CTGGACGGTT TCGAGCTGAA CCTGAAGTCG
AACAAGCCGA TCACCCTGAA GTTCCGCGAT GCGAAGCTCA AGGAGATCTT CACCATCCTT
TCCCAGCTCT CAGGCATCAA CTTCGTCTTC GACGAGGCGG TGAAGGACGT GAACGTCACG
CTGCACTTGG AGAACGGCTC GTTCCAGCAG GCGATGGAAC TGATCACCGG GATGCATAAG
CTGGACAAGA AGATCCTGAA CGAGAGCACC ATCATCATCT ATCCGAAGAC CCCGGACAAG
GTCAAGCAGT ACGAAGAACT CTTTCTGCAG ACCTTCTACC TGAACAAGCT GGACGCGAAG
AAGGCGGTCA ACCTGGTGCG CACCATGCTC CAGGTGAAGA AGATCTATGT GAACGAGGAG
GCGAACGCAC TGGTCCTCCG CGACAAACCT GAAGTCATCG AGGTGGCGCG CAAGATTCTG
GAAGCCAACG ACGTTCCCGA CGCCGAGGTG CTCCTCGAGG TGGAGGTGTT CGAACTCTCC
AAGCAGAACG CCGAGACCTT CGGACTGCTC CTCTCCAGGT ATGCCACCTC CATGGGGGTG
ACCGGTCCGG GAAGCACCTC CGGCGGCAGC CCGTTCCTGG CTGACACGCT GGGAGCAGTC
ACCACCACCA CGACCGGGAC AGGTACGGCT ACCACCTCTG CTCAGCCGTC CAACCTGTTG
AACGTGTTCA ACCTGCGGGG GTATAACGGC TACCTGACCG TTCCGAACGC CACCTTCAAC
TTCGGCAAGA CCCTCTCCAA CGGCGAGACC CTCTCCAACC CGAAGATCAG GGTGAAGAAC
CGGGAGAAGG CGAAGTTCAA CGTCGGCACC AGGGTCCCGA TCACCACAAC CTCTTCGCCT
TCCGGCGGCG GCGTCAGCGT CAACGTCCAG TACGTCGACG TCGGGGTCAA GGTGAACGCG
GAGCCGACCA TCCAGCTCAA CAACGAGGTC GCCATCAAGC TGGGTCTGGA GGTCAGCTCC
ATCCTCAACG AGAAGACCAT CGGCACCGAC CAGGCCACCA CCGTGGTCAC CATCGGCACC
AGGAACCTCG ACACGGTGCT GTCTCTCAAA GACGGCGAGA CCAGCATCAT CGGGGGGCTC
ATTCAGAAGA CCCAGACCGA CAGCAAGAAC AAGGTCTTCC TTTTGGGCGA CATCCCGATC
ATCGGACCTC TGTTCAGCAA CACAAGCGAC AAGAAGGACA AGACCGAACT GCTGCTCGCC
ATCACCCCCA GGATCGTGCG CGGCGTGACC GTTCCCGACA ACGACGTCGC CGCCTTCTGG
TCCGGCCGCG AGGACGAGCC CTCGTCGCAC CAGCCGTATT CCTCCTTCAT GGAGCCCGAT
TTCGTCAACC CCGAGGCTGC CGCCGAGGGT GCCCCGGCTC CTGCTGCAGC CAAGCCCGCT
CCCAGGGTGC TGCCTAACCT GGTGCCGGTC CAGAAGAGCG TGCCGGCTCC TGTTCCTGCC
CCTGCTCCTG CCGCCGCCCC TGCTCCTGCT CCTGCCGGTG CTCCGGCTGG TGCCGCTCCC
GCTCCAGAAG GAGCTGCCGC GGCCGTTCCG GCACCTGCCC CGGGAGCCGT TCCGGCCGCG
GGGGATGTAC CGGTACCTGT GCCGGTGCCC GCGCCTGTAC CTGTGCCTGT ACCTGCTCCG
GTTCCCGCTC CCGCCGCACC CGCGACCGCA AAGCAGCCGC TTCTGACCGA TTCGCTGATC
GCGCTGAGCC TTCCGGCCAA GGTGAAGCTG AACGACCAGT TCAACGTGCA GGTGAACGGG
TCCGGGATGG GGGATATGTA CAAGGCGGTC TTCGTGCTCT CTTACGATCC CAAGCTCCTG
GACGCCGTCT CGCAGTCCGA GGGGAACCTC TTGAAGCAAC CCGGAAAGCC TTCCGCCTTC
CAGGCCTTCG CGGACAAGAA AAAGGGTGAG ATCTGGATGT CCGGCATGCG CGAGGAGCCG
ACCGGTACGG CCAACGGCAT CCTGGCCAAT GTCAGCTTCA AGGCGATAGG GCCGGGATCG
GCCGCCGTTT CCGTGATCAA CACCAACTTC AGCAAGAAGA CGGGCGAGCA GATTCCGGTC
ACCGCCTTCA AATCCGTAGT GGAGGTACAG TAG
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| Protein sequence | MHRPRPILTL MLVALALSGC TSGRTAFSKA EKLEREGNLD AALVKYAEVS AANPDIGEYR
VKLLNITETA ARVHFKKGEE FFAKNNYDEA LREFQSAYAM DPTNVLAKNQ ADHVLKLRNA
QTYLLEGLDF EKNRKPREAM IAFKHALEFH PSNKEAKEGL DRIIANKRQK LDGFELNLKS
NKPITLKFRD AKLKEIFTIL SQLSGINFVF DEAVKDVNVT LHLENGSFQQ AMELITGMHK
LDKKILNEST IIIYPKTPDK VKQYEELFLQ TFYLNKLDAK KAVNLVRTML QVKKIYVNEE
ANALVLRDKP EVIEVARKIL EANDVPDAEV LLEVEVFELS KQNAETFGLL LSRYATSMGV
TGPGSTSGGS PFLADTLGAV TTTTTGTGTA TTSAQPSNLL NVFNLRGYNG YLTVPNATFN
FGKTLSNGET LSNPKIRVKN REKAKFNVGT RVPITTTSSP SGGGVSVNVQ YVDVGVKVNA
EPTIQLNNEV AIKLGLEVSS ILNEKTIGTD QATTVVTIGT RNLDTVLSLK DGETSIIGGL
IQKTQTDSKN KVFLLGDIPI IGPLFSNTSD KKDKTELLLA ITPRIVRGVT VPDNDVAAFW
SGREDEPSSH QPYSSFMEPD FVNPEAAAEG APAPAAAKPA PRVLPNLVPV QKSVPAPVPA
PAPAAAPAPA PAGAPAGAAP APEGAAAAVP APAPGAVPAA GDVPVPVPVP APVPVPVPAP
VPAPAAPATA KQPLLTDSLI ALSLPAKVKL NDQFNVQVNG SGMGDMYKAV FVLSYDPKLL
DAVSQSEGNL LKQPGKPSAF QAFADKKKGE IWMSGMREEP TGTANGILAN VSFKAIGPGS
AAVSVINTNF SKKTGEQIPV TAFKSVVEVQ
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