| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2991 |
|---|
| Symbol | |
|---|
| ID | 8138334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3476670 |
|---|
| End bp | 3478127 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644870589 |
|---|
| Product | succinic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_003022778 |
|---|
| Protein GI | 253701589 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1.6539300000000001e-18 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGTTC TCAAGGACAG CAATCTTTTC CAGCAGCTCT GCTACATAAA CGGCGCGTGG
ACCGGCGCTG ACAGCGGCGA GACCATCGAT GTCACCAACC CCGCCACCGG CGAGAAACTC
GGAACCATCC CCAAGATGGG GGGCGCCGAG ACCCGACGCG CCATCGAAGC CGCCAACGCA
GCGTTTCCCA AGTGGCGCTC CAAGACGGCG CAGGAGCGCT CCACCATCCT CAGGCGCTGG
TCCGAACTGC TCCTGGAGCA CCAGGAGGAC TTAGCCGTTT TGATGACCGC AGAACAGGGG
AAGCCGCTGG CAGAGTCGCG GGGCGAGACC GTTTACGCCG CGTCCTTTCT GGAGTGGTTC
GCGGAGGAGG CGAAACGGAT CTACGGCGAC GTGATCCCGC CGCATCAAAG CGATAAGAGG
ATCGTGGTCC TGAAGGAGCC GATCGGCGTC TGCGCCGCCA TTACCCCCTG GAATTTCCCC
TCCGCGATGA TCACCAGGAA GGCGGGGCCC GCGCTCGCCG CCGGGTGCAC CATGGTGGTA
AAGCCCGCGA CCGCGACCCC GTATTCGGCG CTGGCACTGG CAGAGCTTGC CCGCCGCGCC
GGGGTCCCCG AGGGCGTCTT CTCCGTGGTC ACCGGCTCGG CTGCGGGGAT CGGCGGGGAG
ATGACGGCGA ACCCCATCGT GCGCAAGCTC ACCTTCACCG GTTCCACCGA GATCGGGAAG
AAGCTGATGG CCGAGTGCGC CGGCACGGTG AAGAAGGTCT CCATGGAGCT CGGCGGCAAC
GCCCCCTTCA TAGTCTTCGA CGACGCCGAC ATCGACGCCG CGGTCGAGGG GGCGCTCATC
TCCAAGTACC GCAACACCGG CCAGACCTGC GTCTGCACCA ACCGTTTCCT GGTCCAGGAC
GGGGTCTACG ACCGGTTCGC GGAAAAATTG GCGCGAGCCG TCGCCAACAT GAAGGTCGGA
GACGGCCTGA AAGGCGAGAC CCAGCAGGGT CCGCTGATCG ACATGAAAGC GGTGGAGAAG
GTGGAGGAAC ATATCCAGGA CGCGCTTGCC GGCGGGGCGC GCGTGGTGAC CGGCGGCAAG
CGCCATGCGC TGGGGGGGAG CTTCTTCGAG CCTACCGTCC TGACCGACGT GAAGCCCGGG
ATGCTGGTGG CGAAAGAGGA GACCTTCGGC CCGTTGGCGC CGCTGTTCCG CTTTAAGACC
GAAGAGGAGG CGGTACACAT GGCAAACGAC ACCGAGTTCG GCCTCGCCGC CTACTTCTAC
AGCCAGGACG TCTCCAGGGT CTGGCGGGTC GCCGAGGCCA TCGAATATGG CATCGTCGGC
ATCAACACCG GTCTCATCTC CACCACCGTC GCCCCCTTCG GCGGCGTAAA GGAGTCCGGC
ATCGGGCGCG AAGGATCAAA GTACGGCATC GAGGACTTCC TCGAGGTCAA GTACCTCTGC
ATAGGCGGCG TGAAGTAG
|
|---|
| Protein sequence | MLVLKDSNLF QQLCYINGAW TGADSGETID VTNPATGEKL GTIPKMGGAE TRRAIEAANA
AFPKWRSKTA QERSTILRRW SELLLEHQED LAVLMTAEQG KPLAESRGET VYAASFLEWF
AEEAKRIYGD VIPPHQSDKR IVVLKEPIGV CAAITPWNFP SAMITRKAGP ALAAGCTMVV
KPATATPYSA LALAELARRA GVPEGVFSVV TGSAAGIGGE MTANPIVRKL TFTGSTEIGK
KLMAECAGTV KKVSMELGGN APFIVFDDAD IDAAVEGALI SKYRNTGQTC VCTNRFLVQD
GVYDRFAEKL ARAVANMKVG DGLKGETQQG PLIDMKAVEK VEEHIQDALA GGARVVTGGK
RHALGGSFFE PTVLTDVKPG MLVAKEETFG PLAPLFRFKT EEEAVHMAND TEFGLAAYFY
SQDVSRVWRV AEAIEYGIVG INTGLISTTV APFGGVKESG IGREGSKYGI EDFLEVKYLC
IGGVK
|
|---|
| |