| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2985 |
|---|
| Symbol | |
|---|
| ID | 8138328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 3467946 |
|---|
| End bp | 3469322 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644870583 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_003022772 |
|---|
| Protein GI | 253701583 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 6.17832e-26 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA TAAGCACCAG GGGAAAGATA GCGCCGGTCG GTTTCAAGGA CGCGGTCATG
ATGGGACTTG CCACCGACGG CGGGCTGATT CTTCCGGAAT CGATCCCGCA GATCGACCGC
GGCACCCTGG CCGCCTGGTC CAAGCTCCCC TACCGCGAGC TCGCCTTCAA CGTCATCTCC
CTTTTCGCCA CGGACATCCC GGCTGCGGAC CTGAAGGAGC TCATCGACCG CTCCTACGGA
AGCTTCGAGC ACCAGGAGAC CACCCCGCTG GTGAAAAAGG ACGGCGTCTA TATCCTGGAG
CTCTTCCACG GCCCCACCCT CGCCTTCAAG GACGTGGCGC TGCAGCTTCT GGGCAATCTC
TTCGAGTACC TTTTGAAGGA GCGCGGGGAG AAGATGAACA TCCTCGGCGC CACATCGGGC
GACACCGGGA GCGCGGCCAT CGCCGGGGTG CGCGGCAAGG AGAACATCAA CATCTTCATC
CTGCATCCGC ACCTGAAGAC CTCGCCGATC CAGGCGCTGC AGATGACCAG CGTGCTCGAC
GAGAACGTGC ACAACGTCGC GGTGGAGGGG ACCTTCGACG ACTGCCAGAA CATCGTGAAG
AGCCTCTTCA ACGACCTTCA GTTCAAGAAG GAGTACGCGC TCGGCGCGGT GAACTCGATC
AACTGGGCGC GGGTCTTGGC CCAGGTCGTC TACTACTTCT ACGCCTGGGG GAGGCTCCCG
GAGCAAAAAG AGGTGATCTT CTCCGTCCCC ACCGGCAACT TCGGCGACAT CTTCGCCGGC
TACCTCGCCA AGCGGATGGG GCTCCCCGTG GAGAAGCTGC TTCTTGCCAC CAACGAGAAC
AACATCCTCT CCCGCTTCGT GCAAACCGGC GACTATTCGC TCGGGAAGGT GGTGCAGACC
GTCTCCCCCT CCATGGACAT CCAGCTCGCC TCCAACCTTG AGCGCTACCT CTACTACCTC
TGGGACGAGA ACCCGGAAAA GGTGCAAAGC GCCTTCGCCG AACTGCAGTC GACCGGCAGG
ATCGCGTTCA CGAACGAGCA GGTGCTAAGG GTGCAGGCGG AGTTCATGAG CTGCACGGTG
GACGAGCAGA AGACCCTGGA CACCATCGCC TCCTTCAACC GCGAAACCGG CTACCTCCTC
GACCCCCACA CCGCGGTCGG CGTGCGCGGC GCCCTGGTAT GCGCGCCGGG CCACCCGAGG
GTGGTCTGCC TCGCCACCGC CCACCCGGCG AAATTCGGGG ATGCCGTCGA GCGCGCCGTA
GGCTCCCCCC CCCCGCTTCC CCCGGCACTC GCGGCCCTGG TGGGGAAAGA GACCCGCTGC
GAGCTGATGG CGCCCGACCA GGAGAAGATC AAGGCGTTCG TCAAGGCCAA GGCTTAA
|
|---|
| Protein sequence | MKYISTRGKI APVGFKDAVM MGLATDGGLI LPESIPQIDR GTLAAWSKLP YRELAFNVIS
LFATDIPAAD LKELIDRSYG SFEHQETTPL VKKDGVYILE LFHGPTLAFK DVALQLLGNL
FEYLLKERGE KMNILGATSG DTGSAAIAGV RGKENINIFI LHPHLKTSPI QALQMTSVLD
ENVHNVAVEG TFDDCQNIVK SLFNDLQFKK EYALGAVNSI NWARVLAQVV YYFYAWGRLP
EQKEVIFSVP TGNFGDIFAG YLAKRMGLPV EKLLLATNEN NILSRFVQTG DYSLGKVVQT
VSPSMDIQLA SNLERYLYYL WDENPEKVQS AFAELQSTGR IAFTNEQVLR VQAEFMSCTV
DEQKTLDTIA SFNRETGYLL DPHTAVGVRG ALVCAPGHPR VVCLATAHPA KFGDAVERAV
GSPPPLPPAL AALVGKETRC ELMAPDQEKI KAFVKAKA
|
|---|
| |