Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2981 |
Symbol | infB |
ID | 8138324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3462276 |
End bp | 3465218 |
Gene Length | 2943 bp |
Protein Length | 980 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644870579 |
Product | translation initiation factor IF-2 |
Protein accession | YP_003022768 |
Protein GI | 253701579 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 2.22631e-28 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCAAAA CCCGCGTATA TGAGCTGGCG CAGCAGATGG GGATAGACAA TAAAGAGCTT ATGGCAAGGC TGGCCGACGC CGGTGTGTCG GTGAAGAACC ATATGGCGGT CCTTGAGGAT TCGGATATCA AGGCGCTGTC CGCCCCTGCG CAGACACCCC ACAAAGAAGT CTCCCAGGAG GAAGTCCGGG TCAAGCCGAC CCTGATCCGC CGCCGGGCCA AGGCCGTCGA ACCCGAGGCC GCTGCAGCCG AAGCCGCACC CGCTCCCGCG GCTCAGGAAG AGGCACCGCT AAAGGCCGAG CCGGAGAAGG TCGAGCCCGA GAAGGCCGAG GCACCCAAGC CTCGCCAGGC AGCGGAACCG GTCCGCGCCC GCATCATCGA GGCGGCCCCC GTGCCTAAGC CCGCAGCGGC ACCCGCCGAG GCGGCGAAGC CAGAGAAGGA AAAGCCGGCC GAGCCGGCAC CCGCTCCCAA GGCTGCGGAA GCTCCGGCGG CACCCGCCGC GGAAGCCGCC CCTGCACCGG CCCCGGCCCC GACGGAGGCT CCGGCAGCGA AGCCGGAAGC GCCCGCCCCG ACGGCACCCG CGGCGCCGGT CGCGGCCGCC CCCGCCGAGG CCCAGGCCCC GGCCAAGGTC GAAGAGCCGG AGCCCGAAAA GGCGACCCCC ACAAGGGCGA GGATCCTCGG CAGGGTGGAG ATCCCGATTC CCGCGCAGCG CCCCGCCGAG CGCCGCGAAT ACCAGCGCAC CGCGCCGGGC GAGCGCCCCG CGCCGCGTCC GGGCATGCCG CGCGGCGTCG AGCGCCCCGG CACCGAACGC CCCGCGCCCC GTCCGGGTGG GCCGCGTCCT GCCGGCGCCC CTGGCCGTCC CGGCGAGCGT CCGACCACAG GCCGCCCCGG CGGACCCGCA GGGGGGCGTC CCGACCGTCC CGCACCGCTC GCCCCGATAG ATGCGCCGCC GCTTCTGGGC GACGACCGCC GCAAAGGGAG AAAGCCGGCC CCTGCCGGCG GCACCGATTA CGCCAAGAAC GGCAAGAAGG GCGCCCCCGC CGCCGCAGGC AAGGGGAAGA AGGAGACCTT CAAGGACATC CTCGACAAGC GCGAGCGCGT CTTCGAGCCG GGTCCCCGTT CCAAGGGCAA AAAGGGTAAA TACGAGAAGG TCCAGATCGG CAAGAAGACC GAGATCACGG TTCCCAAGGC CATCAAGAGG ATCATCAAGA TCTCCGAGTC CATCACCGTC GGCGAACTCG CCAAGAGGAT GGGGATCAAG GCCACCGACC TGATCCGCGC GCTGATGAAG CTGGGGGTCA TGGCCACCAT CAACCACCCG CTCGACTTCG ACACCGCTAC TCTTCTCGCC ACCGACTTCG GCTACGAGAT CGAGAACGTG GCGCTCGACG TGGACGAGAT CCTAGAGGCG GAGCCGGATG CGCCGGAGTC CCTGCTGAAG CGTCCGCCGG TCGTCACCAT CATGGGTCAC GTCGACCACG GCAAGACCTC GCTTCTGGAC GCCATCCGCG AAGCCAACGT CATAGCCGGC GAGGCCGGCG GCATTACCCA GCACATCGGC GCCTACGACG TGGAGCTGAA CGGGAAGAAG ATCACCTTCC TAGATACCCC GGGCCACGAG GCGTTCACCG CCATGCGCGC CAGGGGAGCC AAGGTCACCG ACATCGTCAT CCTGGTGGTG GCGGCGGACG ACGGCGTCAT GCCGCAGACC CGCGAGGCGG TGAACCACTC GAAGGCCGCT GGCGTTCCCA TCATCGTGGC GATCAACAAG ATCGACAAGC CCGATGCGAG CCCCGGCAAG GTGAAGCAGG AACTGATGGA GTTCGGCTTG GTTTCCGAGG AGTGGGGCGG GGAGACCATC TTCGTCGAGG TCTCCGCCAA GAAGCGGATC AACCTGGAAT CGCTTTTGGA AATGGTTCTC TTGCAGGCCG ATGTACTGGA GTTGAGGGCC AATCCGGAAA AAGCGGCACG CGGCACCGTC GTTGAGGCGA AGCTGGACAA GGGGCGCGGC CCGGTCGCGA CCATCTTGGT CCAGGAAGGG ACCCTGAAAA GCGGCGACTA CTTCGTTGCG GGGGTCCACT ACGGACGCGT CCGCGCCATG CAGAACGACC GCGGCGAGAA GGTCCTTGCC GCCGGCCCGG CCATGCCGGT CGAGGTGATC GGCTTCAACG GGGTTCCCGA CGCGGGCGAC ATCTTCGTGG CCATGGGCGA CGAGAAACAG GCCAAGGAGA TCGCGAACCA CCGCCAGATG AAGCTGCGCG AGTCGGAACT GGCCAAGCAC AGCAAGCTAT CCCTGGAGCA GCTCTACGAG AAGATCCAGA AGGGCGAGGT GAAGGACCTG AACGCGATCG TCAAGGGGGA CGTCCAGGGT TCGGTAGAGG CAGTGGCCGA GTCGCTCAGA AAGCTCTCCA CCGACGCCAT CCGTCTCAAC GTGCTGCACG CCTCGGTCGG CGCCATCACC GAGACCGACG TGAACCTCGC CAGCGCCTCC AACGCCATCA TCCTCGGCTT CAACGTCCGT CCCGAGGTCA AGGCTGCGGC GCTTGCCGAG AAGGAAGGGG TCGACGTCAG GCTCTACAAC ATCATCTACG ACGCGGTGGA CGACATCAAG AAGGCGATGG AAGGGCTCCT GGAGCCGACC TTCAAGGAGA AGTACCTGGG TCGAGCCGAG ATCAGGGAGG TATTCTCCGT GCCCAAGGCC GGCATGGTCG CCGGTTCCTA CGTCACCGAC GGCAAGATCG TCAGAAACGC CCAGGTCCGC CTTTTGCGCG ACAACATGGT GGTCTACGAA GGGAAGCTGG GAAGCCTGCG CCGCTTCAAG GACGACGTGA AGGAAGTGGC CACCGGCTAC GAGTGCGGCA TGTCCCTGGA GAACTACAAC GACCTCAAAG TCGGCGACAT CTTCGAGTGC TTCGAGATGG AGAAGGTAGC CGGCAAGCTG TAA
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Protein sequence | MSKTRVYELA QQMGIDNKEL MARLADAGVS VKNHMAVLED SDIKALSAPA QTPHKEVSQE EVRVKPTLIR RRAKAVEPEA AAAEAAPAPA AQEEAPLKAE PEKVEPEKAE APKPRQAAEP VRARIIEAAP VPKPAAAPAE AAKPEKEKPA EPAPAPKAAE APAAPAAEAA PAPAPAPTEA PAAKPEAPAP TAPAAPVAAA PAEAQAPAKV EEPEPEKATP TRARILGRVE IPIPAQRPAE RREYQRTAPG ERPAPRPGMP RGVERPGTER PAPRPGGPRP AGAPGRPGER PTTGRPGGPA GGRPDRPAPL APIDAPPLLG DDRRKGRKPA PAGGTDYAKN GKKGAPAAAG KGKKETFKDI LDKRERVFEP GPRSKGKKGK YEKVQIGKKT EITVPKAIKR IIKISESITV GELAKRMGIK ATDLIRALMK LGVMATINHP LDFDTATLLA TDFGYEIENV ALDVDEILEA EPDAPESLLK RPPVVTIMGH VDHGKTSLLD AIREANVIAG EAGGITQHIG AYDVELNGKK ITFLDTPGHE AFTAMRARGA KVTDIVILVV AADDGVMPQT REAVNHSKAA GVPIIVAINK IDKPDASPGK VKQELMEFGL VSEEWGGETI FVEVSAKKRI NLESLLEMVL LQADVLELRA NPEKAARGTV VEAKLDKGRG PVATILVQEG TLKSGDYFVA GVHYGRVRAM QNDRGEKVLA AGPAMPVEVI GFNGVPDAGD IFVAMGDEKQ AKEIANHRQM KLRESELAKH SKLSLEQLYE KIQKGEVKDL NAIVKGDVQG SVEAVAESLR KLSTDAIRLN VLHASVGAIT ETDVNLASAS NAIILGFNVR PEVKAAALAE KEGVDVRLYN IIYDAVDDIK KAMEGLLEPT FKEKYLGRAE IREVFSVPKA GMVAGSYVTD GKIVRNAQVR LLRDNMVVYE GKLGSLRRFK DDVKEVATGY ECGMSLENYN DLKVGDIFEC FEMEKVAGKL
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