| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2976 |
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| Symbol | |
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| ID | 8138319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3457299 |
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| End bp | 3459389 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644870574 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003022763 |
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| Protein GI | 253701574 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 6.31401e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTACACA CCGTACAGGC AGAATGCTGT GGCAAGACAA TCACAATCGA AACGGGAAAG
ATCGCGAAGC AGGCAAGCGG CGCGGTCATG ATCAAAAGCG GCGACACCAT GGTGCTCGTC
ACCGCCGTCG CCATGAAGAG CGCCAAGGAA GGGCAGGGCT TCTTCCCGCT CACCGTCAAC
TACCAGGAGA AGGCGTACGC GGGGGGCCGC ATCCCCGGAT CCTTCTTCAA GCGCGAGGGG
CGTCCCTCCG ACAACGAGAC CCTGACCTGC CGTCTCATCG ACCGCCCGAT CCGTCCGCTG
TTCCCTGAAG GGTTCCTGAA CGATACCCAG GTCATGGCGA CCGTGGTCTC GGCCGACAAG
GACAACGACC CGGCTATCCT CTCCATGATC GGCGCTTCTG CCGCCCTGAT GGTCTCCGAT
TGCCCGTTCG CAGGCCCCAT CGCCGGCGTC AAGGTCGGCC GCGTAAACGG CGCTTTCATC
GCCAACCCGA CCGCCGAAGA GCTGGAGAAA AGCGACCTCG AGATCGTGAT CGCCGCCAGC
CAGGAAGCGA TCCTGATGGT GGAAGGTTCC GCCGCCGAGG TCTCCGAGAA CGACTTGCTG
GAAGCGATCT TCTTCGGCCA CGCCGCTGTG CAGCCGATAC TGGCCGCCCA GCTCGAGCTC
GCCAAGAAGG TGGGCACCCC CAAGCGCGTG ATTCTGGCTC CGGTCGTTAA CGAAGAGCTG
AAGGCCCGCG TGGCCGCCCT CGCCAAAGAG GGGATGAAGC AGGCGGTCCG GATCAAGACC
AAGGTTGAGC GCCACCTGGC TATCGACGCC ATCACTGCCG AGACCGTCGC GGCCCTTGCC
GCCGAGTTCG AAGGTTCCGA GAAGGAAGTA AAGGGATTCA TCGAAGACCT CGAGTACGAC
CTGGTGCGTG AGCACATCAT AAAGGACGGC CAGAGGATCG ACGGGCGCGA TACCAAGACC
ATCCGCGCCA TCTCCACCGA AGTAAGCCTG CTCCCCCGCG CTCACGGCTC CGCCCTGTTC
ACCCGCGGCG AGACCCAGTC CATCGTGGCG GCGACGCTTG GCACCTCGGT CGACGAGCAG
CGCATCGACT CGCTTTACGG TGACTCCAGG AAGAAGTTCA TGCTGCACTA CAACTTCCCT
CCGTACTCCG TCGGCGAGAC CAGCTTCCGC CTCGCTCCGG GGCGCCGCGA GATCGGCCAC
GGCATGCTTG CCGAGCGCGC CCTGCAGCAG GTGCTTCCGA AGCATGACGA CTTCCCCTAT
ACCATCAGGA TCGTCTCCGA CATCACCGAG AGCAACGGCT CCTCCTCGAT GGCGACCGTC
TGCGGCGGCT CGCTGTCCAT GATGGACGCC GGCATCCCGA TCAAGGCGCC GGTTGCCGGC
ATCGCCATGG GCCTCATCAA AGAAGGCGAC GATTTCGCCA TCCTCTCCGA CATCCTCGGC
GACGAAGACC ACCTGGGCGA CATGGACTTC AAGGTGGCGG GTACCGCCGA AGGCGTCACC
GCGCTGCAGA TGGACATCAA GATCGGCGGC GTCACCCGCG AGATCATGAG CGCGGCGTTG
GCTCAGGCCA AAGCAGGCAG GATCCACATC TTGGGCGAGA TGGCCAAGAC CATCGCGGCA
TCGCGCGGCG ACCTCTCCGC CTTCGCGCCG CGCATCACCA CCATATGGGT CAAGGTCGAC
AAGATCCGCG ACGTCATAGG CTCCGGTGGC AAGAACATCA GGAGCGTCAC CGAGGCGACC
GGCGTCTCCA TCGACATCGA CGACACCGGC AAGATCAACA TCGCTTCCAC CAACAAGGAA
GCCTGCGACC TCGCCATTAA GATGATCAGG AACCTCACCG CCGAGGCCGA GGAAGGAAAG
CTCTACATGG GCACCGTGAA AAAGATCATG GAATTCGGCG CCTTCGTGGA GATCTTCCCG
GGAACCGACG GCCTGGTCCA CGTCTCCGAG CTCGACACCG AGCGCGTCAA GAACGTGAGC
GACATCCTCA AAGAGGGCGA CAAGGTCCTG GTTAAGTGCA TCGGCATCGA CAAGCAGGGC
AAGATCAAGC TCTCCCGTAA AGAGGCTCTG GGACAGACTT TCACCGAATA A
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| Protein sequence | MVHTVQAECC GKTITIETGK IAKQASGAVM IKSGDTMVLV TAVAMKSAKE GQGFFPLTVN
YQEKAYAGGR IPGSFFKREG RPSDNETLTC RLIDRPIRPL FPEGFLNDTQ VMATVVSADK
DNDPAILSMI GASAALMVSD CPFAGPIAGV KVGRVNGAFI ANPTAEELEK SDLEIVIAAS
QEAILMVEGS AAEVSENDLL EAIFFGHAAV QPILAAQLEL AKKVGTPKRV ILAPVVNEEL
KARVAALAKE GMKQAVRIKT KVERHLAIDA ITAETVAALA AEFEGSEKEV KGFIEDLEYD
LVREHIIKDG QRIDGRDTKT IRAISTEVSL LPRAHGSALF TRGETQSIVA ATLGTSVDEQ
RIDSLYGDSR KKFMLHYNFP PYSVGETSFR LAPGRREIGH GMLAERALQQ VLPKHDDFPY
TIRIVSDITE SNGSSSMATV CGGSLSMMDA GIPIKAPVAG IAMGLIKEGD DFAILSDILG
DEDHLGDMDF KVAGTAEGVT ALQMDIKIGG VTREIMSAAL AQAKAGRIHI LGEMAKTIAA
SRGDLSAFAP RITTIWVKVD KIRDVIGSGG KNIRSVTEAT GVSIDIDDTG KINIASTNKE
ACDLAIKMIR NLTAEAEEGK LYMGTVKKIM EFGAFVEIFP GTDGLVHVSE LDTERVKNVS
DILKEGDKVL VKCIGIDKQG KIKLSRKEAL GQTFTE
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