| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2957 |
|---|
| Symbol | |
|---|
| ID | 8138300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3438019 |
|---|
| End bp | 3438939 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644870555 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_003022744 |
|---|
| Protein GI | 253701555 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 93 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCG TCTGCATCGG GGTGGACGTC GGGGGGACCA ACCTCCGCTT CGCCCTGGTG
GACCAAGGCG GCGCCGTGCT TTTCAGGGTG AGCGAAACGA CGGAGACGGT GAGGGCTTCC
GCGCCCTTCG TAGCCCGGCT CAAGGGGGGG GTGGAACGGC TGCAAAGGGA GGCGCTGGCC
CGGGGAGCCG GGGTCGCCGG CGTCGGAATC GGTGTCGCCG GTCTTGTCGC TGGAGACGGT
GTGCTTCTCT CCAGCGTCAA CCTCCCGGCG CTTGAGGGGG TAAACCTCGG CGAGGAGCTT
TCGCGCGCCC TGGGACTGCC GGTGCTGGTT TTAAACGACG CCAACGCCTG CGCCGTCGGC
GAACAACGGT TCGGCGCGGG TAAGGGTTAC CGCTCCTGGC TCATGCTCAC CATCGGCACG
GGGGTGGGAG CGGGGCTGAT ACTCGACGGC CGGCTCTGGA CCGGGGCGAA CGGGCTGGCC
GGCGAATTGG GGCACCTGAC GGTGGAACCG GAAGGGCGCC CGTGCGGCTG CGGCAACCGG
GGATGCCTGG AGCAGTACAC CTTCGCCACC GCCATCTCCG CGGGAAACGA CAGCGCCGCC
GCCGTCGCCC GGCGCGCGTT GAGCGGTGAC ACCGCGGCCC TCGCCCGTTT CGAGGAGGCC
GGCCGCTACT TGGGGATCGC CGCGGCCGGG GTGCTGAACC TGCTGAACCT GGAAGCGGTG
ATCCTCGGAG GTGGCGTGTC CGAGAGTTTC GAGCTCCTGG CTCCGGCGAT GCGCCGGGAG
ATCCGCTCCC GCACCCTCGC GCTTCCCGGG GCGGCCGCCT GCGTCGTCAA GGGCGCCCTC
GGTCCGGACG CCGGTGTCCT GGGCGCTGCC CAAGCCGCCT TCGACGCCGA AAAAATTTCC
TCGCGCTCCC ACCTTTCCTG A
|
|---|
| Protein sequence | MESVCIGVDV GGTNLRFALV DQGGAVLFRV SETTETVRAS APFVARLKGG VERLQREALA
RGAGVAGVGI GVAGLVAGDG VLLSSVNLPA LEGVNLGEEL SRALGLPVLV LNDANACAVG
EQRFGAGKGY RSWLMLTIGT GVGAGLILDG RLWTGANGLA GELGHLTVEP EGRPCGCGNR
GCLEQYTFAT AISAGNDSAA AVARRALSGD TAALARFEEA GRYLGIAAAG VLNLLNLEAV
ILGGGVSESF ELLAPAMRRE IRSRTLALPG AAACVVKGAL GPDAGVLGAA QAAFDAEKIS
SRSHLS
|
|---|
| |